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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Lam, J.W."

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Search Summary

This query matches 11 Structures.

Refinements

Structure Determination Methodology

experimental (11)

Scientific Name of Source Organism

Homo sapiens (11)

Taxonomy

Eukaryota (11)

Experimental Method

X-RAY DIFFRACTION (11)

Polymer Entity Type

Protein (11)

Refinement Resolution (Å)

	1.5 - 2.0 (3)
	2.0 - 2.5 (6)
	2.5 - 3.0 (2)

Release Date

2000 - 2004 (11)

Enzyme Classification Name

Hydrolases (11)

Symmetry Type

	Cyclic (11)
	Dihedral (2)
	Asymmetric (1)

SCOP Classification

Alpha and beta proteins (a/b) (11)

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1 to 11 of 11 Structures

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1NME \| pdb_00001nme	Download File View File

Structure of Casp-3 with tethered salicylate

Erlanson, D.A., Lam, J., Wiesmann, C., Luong, T.N., Simmons, B., DeLano, W., Choong, I.C., Flanagan, M., Lee, D., O'Brian, T.

(2003) Nat Biotechnol 21: 308-314

Released	2003-03-11
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Caspase-3 (protein)
Unique Ligands	158, 159

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1NMQ \| pdb_00001nmq	Download File View File

Extendend Tethering: In Situ Assembly of Inhibitors

Erlanson, D.A., Lam, J., Wiesmann, C., Luong, T.N., Simmons, R.L., DeLano, W., Choong, I.C., Flanagan, M., Lee, D., O'Brian, T.

(2003) Nat Biotechnol 21: 308-314

Released	2003-03-11
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Caspase-3 (protein)
Unique Ligands	160

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1NMS \| pdb_00001nms	Download File View File

Caspase-3 tethered to irreversible inhibitor

Erlanson, D.A., Lam, J., Wiesmann, C., Luong, T.N., Simmons, R.L., DeLano, W.L., Choong, I.C., Flanagan, W.M., Lee, D., O'Brian, T.

(2003) Nat Biotechnol 21: 308-314

Released	2003-03-11
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Caspase-3 (protein)
Unique Ligands	161

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1RWK \| pdb_00001rwk	Download File View File

Crystal structure of human caspase-1 in complex with 3-(2-mercapto-acetylamino)-4-oxo-pentanoic acid

Romanowski, M.J., Lam, J.W., Fahr, B.T., O'Brien, T.

(2005) Acta Crystallogr Sect F Struct Biol Cryst Commun 61: 451-458

Released	2004-12-28
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Interleukin-1 beta convertase (protein)
Unique Ligands	158

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1RWM \| pdb_00001rwm	Download File View File

Crystal structure of human caspase-1 in complex with 4-oxo-3-[2-(5-{[4-(quinoxalin-2-ylamino)-benzoylamino]-methyl}-thiophen-2-yl)-acetylamino]-pentanoic acid

Romanowski, M.J., Waal, N.D., Fahr, B.T., O'Brien, T.

(2005) Acta Crystallogr Sect F Struct Biol Cryst Commun 61: 451-458

Released	2004-12-28
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Interleukin-1 beta convertase (protein)
Unique Ligands	Q2Y

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1RWN \| pdb_00001rwn	Download File View File

Crystal structure of human caspase-1 in complex with 3-{2-ethyl-6-[4-(quinoxalin-2-ylamino)-benzoylamino]-hexanoylamino}-4-oxo-butyric acid

Romanowski, M.J., Fahr, B.T., O'Brien, T.

(2005) Acta Crystallogr Sect F Struct Biol Cryst Commun 61: 451-458

Released	2004-12-28
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Interleukin-1 beta convertase (protein)
Unique Ligands	4QB

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1RWO \| pdb_00001rwo	Download File View File

Crystal structure of human caspase-1 in complex with 4-oxo-3-{6-[4-(quinoxalin-2-ylamino)-benzoylamino]-2-thiophen-2-yl-hexanoylamino}-pentanoic acid

Romanowski, M.J., Waal, N.D., Fahr, B.T., O'Brien, T.

(2005) Acta Crystallogr Sect F Struct Biol Cryst Commun 61: 451-458

Released	2004-12-28
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Interleukin-1 beta convertase (protein)
Unique Ligands	BTH

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1RWP \| pdb_00001rwp	Download File View File

Crystal structure of human caspase-1 in complex with 3-{6-[(8-hydroxy-quinoline-2-carbonyl)-amino]-2-thiophen-2-yl-hexanoylamino}-4-oxo-butyric acid

Romanowski, M.J., Fahr, B.T., O'Brien, T.

(2005) Acta Crystallogr Sect F Struct Biol Cryst Commun 61: 451-458

Released	2004-12-28
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Interleukin-1 beta convertase (protein)
Unique Ligands	HQC

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1RWV \| pdb_00001rwv	Download File View File

Crystal structure of human caspase-1 in complex with 5-[5-(1-carboxymethyl-2-oxo-propylcarbamoyl)-5-phenyl-pentylsulfamoyl]-2-hydroxy-benzoic acid

Romanowski, M.J., Burdett, M.T., Fahr, B.T., O'Brien, T.

To be published

Released	2004-12-28
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Interleukin-1 beta convertase (protein)
Unique Ligands	5PH

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1RWW \| pdb_00001rww	Download File View File

Crystal structure of human caspase-1 in complex with 4-oxo-3-[(6-{[4-(quinoxalin-2-ylamino)-benzoylamino]-methyl}-pyridine-3-carbonyl)-amino]-butyric acid

Romanowski, M.J., Fahr, B.T., O'Brien, T.

(2006) Bioorg Med Chem Lett 16: 559-562

Released	2004-12-28
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Interleukin-1 beta convertase (protein)
Unique Ligands	OQB

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1RWX \| pdb_00001rwx	Download File View File

Crystal structure of human caspase-1 in complex with 4-oxo-3-{6-[4-(quinoxalin-2-yloxy)-benzoylamino]-2-thiophen-2-yl-hexanoylamino}-butyric acid

Romanowski, M.J., Fahr, B.T., O'Brien, T.

(2006) Bioorg Med Chem Lett 16: 559-562

Released	2004-12-28
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Homo sapiens
Macromolecule	Interleukin-1 beta convertase (protein)
Unique Ligands	YBH

1 to 11 of 11 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1NME | pdb_00001nme

Structure of Casp-3 with tethered salicylate

1NMQ | pdb_00001nmq

Extendend Tethering: In Situ Assembly of Inhibitors

1NMS | pdb_00001nms

Caspase-3 tethered to irreversible inhibitor

1RWK | pdb_00001rwk

Crystal structure of human caspase-1 in complex with 3-(2-mercapto-acetylamino)-4-oxo-pentanoic acid

1RWM | pdb_00001rwm

Crystal structure of human caspase-1 in complex with 4-oxo-3-[2-(5-{[4-(quinoxalin-2-ylamino)-benzoylamino]-methyl}-thiophen-2-yl)-acetylamino]-pentanoic acid

1RWN | pdb_00001rwn

Crystal structure of human caspase-1 in complex with 3-{2-ethyl-6-[4-(quinoxalin-2-ylamino)-benzoylamino]-hexanoylamino}-4-oxo-butyric acid

1RWO | pdb_00001rwo

Crystal structure of human caspase-1 in complex with 4-oxo-3-{6-[4-(quinoxalin-2-ylamino)-benzoylamino]-2-thiophen-2-yl-hexanoylamino}-pentanoic acid

1RWP | pdb_00001rwp

Crystal structure of human caspase-1 in complex with 3-{6-[(8-hydroxy-quinoline-2-carbonyl)-amino]-2-thiophen-2-yl-hexanoylamino}-4-oxo-butyric acid

1RWV | pdb_00001rwv

Crystal structure of human caspase-1 in complex with 5-[5-(1-carboxymethyl-2-oxo-propylcarbamoyl)-5-phenyl-pentylsulfamoyl]-2-hydroxy-benzoic acid

1RWW | pdb_00001rww

Crystal structure of human caspase-1 in complex with 4-oxo-3-[(6-{[4-(quinoxalin-2-ylamino)-benzoylamino]-methyl}-pyridine-3-carbonyl)-amino]-butyric acid

1RWX | pdb_00001rwx

Crystal structure of human caspase-1 in complex with 4-oxo-3-{6-[4-(quinoxalin-2-yloxy)-benzoylamino]-2-thiophen-2-yl-hexanoylamino}-butyric acid

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

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Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1NME | pdb_00001nme

1NMQ | pdb_00001nmq

1NMS | pdb_00001nms

1RWK | pdb_00001rwk

1RWM | pdb_00001rwm

1RWN | pdb_00001rwn

1RWO | pdb_00001rwo

1RWP | pdb_00001rwp

1RWV | pdb_00001rwv

1RWW | pdb_00001rww

1RWX | pdb_00001rwx