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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Lai, X."

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Search Summary

This query matches 32 Structures.

Refinements

Structure Determination Methodology

experimental (32)

Scientific Name of Source Organism

	Homo sapiens (15)
	Rattus norvegicus (15)
	Mus musculus (4)
	Human immunodeficiency virus (1)

Taxonomy

	Eukaryota (32)
	Riboviria (1)

Experimental Method

X-RAY DIFFRACTION (32)

Polymer Entity Type

	Protein (32)
	DNA (25)

Refinement Resolution (Å)

	1.5 - 2.0 (12)
	2.0 - 2.5 (6)
	2.5 - 3.0 (7)
	3.0 - 3.5 (5)
	3.5 - 4.0 (2)

Release Date

	2000 - 2004 (1)
	2005 - 2009 (23)
	2010 - 2014 (6)
	2020 - 2024 (2)

Enzyme Classification Name

Hydrolases (2)

Symmetry Type

	Asymmetric (11)
	Cyclic (19)
	Dihedral (2)

SCOP Classification

	Small proteins (17)
	Artifacts (16)
	All beta proteins (5)
	All alpha proteins (3)

AllSelected

1 to 25 of 32 Structures

Page 1 of 2

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1P7H \| pdb_00001p7h	Download File View File

Structure of NFAT1 bound as a dimer to the HIV-1 LTR kB element

Giffin, M.J., Stroud, J.C., Bates, D.L., von Koenig, K.D., Hardin, J., Chen, L.

(2003) Nat Struct Biol 10: 800-806

Released	2003-09-23
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Nuclear factor of activated T-cells, cytoplasmic 2 (protein) 5'-D(APAPTPGPGPGPGPAPCPTPTPTPCPCPA)-3' (nucleic acid) 5'-D(TPTPTPGPGPAPAPAPGPTPCPCPCPCPA)-3' (nucleic acid)

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2A07 \| pdb_00002a07	Download File View File

Crystal Structure of Foxp2 bound Specifically to DNA.

Stroud, J.C., Wu, Y., Bates, D.L., Han, A., Nowick, K., Paabo, S., Tong, H., Chen, L.

(2006) Structure 14: 159-166

Released	2006-01-31
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Forkhead box protein P2 (protein) 5'-D(APAPCPTPAPTPGPAPAPAPCPAPAPAPTPTPTPTPCPCPT)-3' (nucleic acid) 5'-D(TPTPAPGPGPAPAPAPAPTPTPTPGPTPTPTPCPAPTPAPG)-3' (nucleic acid)
Unique Ligands	MG

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2AS5 \| pdb_00002as5	Download File View File

Structure of the DNA binding domains of NFAT and FOXP2 bound specifically to DNA.

Wu, Y., Stroud, J.C., Borde, M., Bates, D.L., Guo, L., Han, A., Rao, A., Chen, L.

(2006) Cell 126: 375-387

Released	2006-08-08
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Forkhead box protein P2 (protein) Nuclear factor of activated T-cells, cytoplasmic 2 (protein) 5'-D(APAPCPTPAPTPGPAPAPAPCPAPAPAPTPTPTPTPCPCPTP)-3' (nucleic acid) 5'-D(TPTPAPGPGPAPAPAPAPTPTPTPGPTPTPTPCPAPTPAPGP)-3' (nucleic acid)
Unique Ligands	MG

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2H8N \| pdb_00002h8n	Download File View File

Structure of a glutamine-rich domain from histone deacetylase 4

Guo, L., Han, A., Bates, D.L., Chen, L.

(2007) Proc Natl Acad Sci U S A 104: 4297-4302

Released	2007-02-27
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Histone deacetylase 4 (protein)

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2O93 \| pdb_00002o93	Download File View File

Crystal structure of NFAT bound to the HIV-1 LTR tandem kappaB enhancer element

Bates, D.L., Chen, L.

(2008) Structure 16: 684-694

Released	2007-06-19
Method	X-RAY DIFFRACTION 3.05 Å
Organisms	Homo sapiens
Macromolecule	actor of activated T-cells, cytoplasmic 2 (protein) kappaB enhancer element, DNA 25-mer (nucleic acid)

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2O94 \| pdb_00002o94	Download File View File

The 97H/F mutant Structure of a glutamine-rich domain from histone deacetylase 4

Guo, L., Han, A., Bates, D.L., Chen, L.

(2007) Proc Natl Acad Sci U S A 104: 4297-4302

Released	2007-02-27
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	Histone deacetylase 4 (protein)

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3DFV \| pdb_00003dfv	Download File View File

Adjacent GATA DNA binding

Bates, D.L., Kim, G.K., Guo, L., Chen, L.

(2008) J Mol Biology 381: 1292-1306

Released	2008-07-29
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Mus musculus
Macromolecule	Trans-acting T-cell-specific transcription factor GATA-3 (protein) DNA (5'-D(DAPDAPDGPDCPDAPDGPDAPDTPDAPDAPDGPDTPDCPDTPDTPDAPDTPDCPDAPDG)-3') (nucleic acid) DNA (5'-D(DTPDTPDCPDTPDGPDAPDTPDAPDAPDGPDAPDCPDTPDTPDAPDTPDCPDTPDGPDC)-3') (nucleic acid)
Unique Ligands	ZN

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3DFX \| pdb_00003dfx	Download File View File

Opposite GATA DNA binding

Bates, D.L., Kim, G.K., Guo, L., Chen, L.

(2008) J Mol Biology 381: 1292-1306

Released	2008-07-29
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mus musculus
Macromolecule	Trans-acting T-cell-specific transcription factor GATA-3 (protein) DNA (5'-D(DAPDAPDGPDGPDTPDTPDAPDTPDCPDTPDCPDTPDGPDAPDTPDTPDTPDAPDTPDC)-3') (nucleic acid) DNA (5'-D(DTPDTPDGPDAPDTPDAPDAPDAPDTPDCPDAPDGPDAPDGPDAPDTPDAPDAPDCPDC)-3') (nucleic acid)
Unique Ligands	ZN

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3FYL \| pdb_00003fyl	Download File View File

GR DNA binding domain:CGT complex

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-21
Method	X-RAY DIFFRACTION 1.63 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(APAPGPAPAPCPAPTPTPTPTPGPTPCPCPG)-3') (nucleic acid) DNA (5'-D(TPCPGPGPAPCPAPAPAPAPTPGPTPTPCPT)-3') (nucleic acid)
Unique Ligands	EDO, ZN

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3G6P \| pdb_00003g6p	Download File View File

GR DNA binding domain:FKBP5 complex, 18bp

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-21
Method	X-RAY DIFFRACTION 1.985 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(CPCPAPGPAPAPCPAPCPCPCPTPGPTPTPCPTPG)-3') (nucleic acid) DNA (5'-D(CPCPAPGPAPAPCPAPGPGPGPTPGPTPTPCPTPG)-3') (nucleic acid)
Unique Ligands	ACT, ZN

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3G6Q \| pdb_00003g6q	Download File View File

GR DNA binding domain:FKBP5 binding site complex-9

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-21
Method	X-RAY DIFFRACTION 2.26 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(APAPGPAPAPCPAPCPCPCPTPGPTPTPCPT)-3') (nucleic acid) DNA (5'-D(TPAPGPAPAPCPAPGPGPGPTPGPTPTPCPT)-3') (nucleic acid)
Unique Ligands	ZN

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3G6R \| pdb_00003g6r	Download File View File

GR DNA binding domain:FKBP5 complex-52, 18bp

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-21
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(CPCPAPGPAPAPCPAPCPCPCPTPGPTPTPCPTPG)-3') (nucleic acid) DNA (5'-D(CPCPAPGPAPAPCPAPGPGPGPTPGPTPTPCPTPG)-3') (nucleic acid)
Unique Ligands	ZN

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3G6T \| pdb_00003g6t	Download File View File

GR gamma DNA-binding domain:FKBP5 16bp complex-34

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(APAPGPAPAPCPAPGPGPGPTPGPTPTPCPT)-3') (nucleic acid) DNA (5'-D(TPAPGPAPAPCPAPCPCPCPTPGPTPTPCPT)-3') (nucleic acid)
Unique Ligands	ZN

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3G6U \| pdb_00003g6u	Download File View File

GR DNA-binding domain:FKBP5 16bp complex-49

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(APAPGPAPAPCPAPCPCPCPTPGPTPTPCPT)-3') (nucleic acid) DNA (5'-D(TPAPGPAPAPCPAPGPGPGPTPGPTPTPCPT)-3') (nucleic acid)
Unique Ligands	ZN

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3G8U \| pdb_00003g8u	Download File View File

DNA binding domain:GilZ 16bp complex-5

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(APAPGPAPAPCPAPTPTPGPGPGPTPTPCPC)-3') (nucleic acid) DNA (5'-D(TPGPGPAPAPCPCPCPAPAPTPGPTPTPCPT)-3') (nucleic acid)
Unique Ligands	ZN

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3G8X \| pdb_00003g8x	Download File View File

GR DNA binding domain:GilZ 16bp complex-65

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-21
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(APAPGPAPAPCPAPTPTPGPGPGPTPTPCPC)-3') (nucleic acid) DNA (5'-D(TPGPGPAPAPCPCPCPAPAPTPGPTPTPCPT)-3') (nucleic acid)
Unique Ligands	EDO, ZN

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3G97 \| pdb_00003g97	Download File View File

GR DNA-binding domain:GilZ 16bp complex-9

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-21
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(APAPGPAPAPCPAPTPTPGPGPGPTPTPCPC)-3') (nucleic acid) DNA (5'-D(TPGPGPAPAPCPCPCPAPAPTPGPTPTPCPT)-3') (nucleic acid)
Unique Ligands	EDO, ZN

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3G99 \| pdb_00003g99	Download File View File

GR DNA binding domain:Pal complex-9

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-21
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(APAPGPAPAPCPAPTPTPTPTPGPTPTPCPT)-3') (nucleic acid) DNA (5'-D(TPAPGPAPAPCPAPAPAPAPTPGPTPTPCPT)-3') (nucleic acid)
Unique Ligands	BR, EDO, ZN

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3G9I \| pdb_00003g9i	Download File View File

GR DNA Binding domain: Pal complex-35

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-21
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(APAPGPAPAPCPAPTPTPTPTPGPTPTPCPT)-3') (nucleic acid) DNA (5'-D(TPAPGPAPAPCPAPAPAPAPTPGPTPTPCPT)-3') (nucleic acid)
Unique Ligands	EDO, ZN

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3G9J \| pdb_00003g9j	Download File View File

GR DNA binding domain:Pal, 18bp complex-36

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-21
Method	X-RAY DIFFRACTION 2.32 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(CPCPAPGPAPAPCPAPAPAPAPTPGPTPTPCPTPG)-3') (nucleic acid) DNA (5'-D(CPCPAPGPAPAPCPAPTPTPTPTPGPTPTPCPTPG)-3') (nucleic acid)
Unique Ligands	EDO, ZN

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3G9M \| pdb_00003g9m	Download File View File

GR DNA-binding domain:Sgk 16bp complex-44

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-21
Method	X-RAY DIFFRACTION 1.61 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(APAPGPAPAPCPAPTPTPTPTPGPTPCPCPG)-3') (nucleic acid) DNA (5'-D(TPCPGPGPAPCPAPAPAPAPTPGPTPTPCPT)-3') (nucleic acid)
Unique Ligands	EDO, ZN

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3G9O \| pdb_00003g9o	Download File View File

GR DNA-binding domain:Sgk 16bp complex-9

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-21
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(APAPGPAPAPCPAPTPTPTPTPGPTPCPCPG)-3') (nucleic acid) DNA (5'-D(TPCPGPGPAPCPAPAPAPAPTPGPTPTPCPT)-3') (nucleic acid)
Unique Ligands	ZN

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3G9P \| pdb_00003g9p	Download File View File

GR DNA binding domain:Sgk 16bp complex-7

Pufall, M.A., Yamamoto, K.R., Meijsing, S.H.

(2009) Science 324: 407-410

Released	2009-04-14
Method	X-RAY DIFFRACTION 1.652 Å
Organisms	Rattus norvegicus
Macromolecule	Glucocorticoid receptor (protein) DNA (5'-D(APAPGPAPAPCPAPTPTPTPTPGPTPCPCPG)-3') (nucleic acid) DNA (5'-D(TPCPGPGPAPCPAPAPAPAPTPGPTPTPCPT)-3') (nucleic acid)
Unique Ligands	ZN

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3GUT \| pdb_00003gut	Download File View File

Crystal structure of a higher-order complex of p50:RelA bound to the HIV-1 LTR

Stroud, J.C., Oltman, A.J., Han, A., Bates, D.L., Chen, L.

(2009) J Mol Biology 393: 98-112

Released	2009-09-08
Method	X-RAY DIFFRACTION 3.59 Å
Organisms	Homo sapiens Human immunodeficiency virus
Macromolecule	Nuclear factor NF-kappa-B p105 subunit (protein) Transcription factor p65 (protein) HIV-LTR Core Forward Strand (nucleic acid) HIV-LTR Core Reverse Strand (nucleic acid)

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3QAZ \| pdb_00003qaz	Download File View File

IL-2 mutant D10 ternary complex

Levin, A.M., Bates, D.L., Ring, A.M., Lin, J.T., Su, L., Krieg, C., Bowman, G.R., Novick, P., Pande, V.S., Khort, H.E., Boyman, O., Gathman, C.G., Garcia, K.C.

(2012) Nature 484: 529-533

Released	2012-04-11
Method	X-RAY DIFFRACTION 3.802 Å
Organisms	Homo sapiens
Macromolecule	Cytokine receptor common subunit gamma (protein) Interleukin-2 (protein) Interleukin-2 receptor subunit beta (protein)
Unique Ligands	NAG

1 to 25 of 32 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1P7H | pdb_00001p7h

2A07 | pdb_00002a07

2AS5 | pdb_00002as5

2H8N | pdb_00002h8n

2O93 | pdb_00002o93

2O94 | pdb_00002o94

3DFV | pdb_00003dfv

3DFX | pdb_00003dfx

3FYL | pdb_00003fyl

3G6P | pdb_00003g6p

3G6Q | pdb_00003g6q

3G6R | pdb_00003g6r

3G6T | pdb_00003g6t

3G6U | pdb_00003g6u

3G8U | pdb_00003g8u

3G8X | pdb_00003g8x

3G97 | pdb_00003g97

3G99 | pdb_00003g99

3G9I | pdb_00003g9i

3G9J | pdb_00003g9j

3G9M | pdb_00003g9m

3G9O | pdb_00003g9o

3G9P | pdb_00003g9p

3GUT | pdb_00003gut

3QAZ | pdb_00003qaz