RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Jaeger, C."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 14 Structures.

Refinements

Structure Determination Methodology

experimental (14)

Scientific Name of Source Organism

Homo sapiens (14)

Taxonomy

Eukaryota (14)

Experimental Method

X-RAY DIFFRACTION (14)

Polymer Entity Type

Protein (14)

Refinement Resolution (Å)

	1.5 - 2.0 (7)
	2.0 - 2.5 (5)
	2.5 - 3.0 (2)

Release Date

	2015 - 2019 (11)
	2020 - 2024 (3)

Enzyme Classification Name

Transferases (12)

Symmetry Type

Asymmetric (14)

SCOP Classification

Alpha and beta proteins (a+b) (4)

AllSelected

1 to 14 of 14 Structures

Page 1 of 1

Sort by

Explore in 3D

5H19 \| pdb_00005h19	Download File View File

EED in complex with PRC2 allosteric inhibitor EED162

Zhao, K., Zhao, M., Luo, X., Zhang, H.

(2017) PLoS One 12: e0169855-e0169855

Released	2017-01-25
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Histone-lysine N-methyltransferase EZH2 (protein) Polycomb protein EED (protein)
Unique Ligands	LQF

Explore in 3D

5H24 \| pdb_00005h24	Download File View File

EED in complex with PRC2 allosteric inhibitor compound 8

Zhao, K., Zhao, M., Luo, X., Zhang, H.

(2017) J Med Chem 60: 2215-2226

Released	2017-01-25
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Histone-lysine N-methyltransferase EZH2 (protein) Polycomb protein EED (protein)
Unique Ligands	LQG

Explore in 3D

5H25 \| pdb_00005h25	Download File View File

EED in complex with PRC2 allosteric inhibitor compound 11

Zhao, K., Zhao, M., Luo, X., Zhang, H.

(2017) J Med Chem 60: 2215-2226

Released	2017-01-25
Method	X-RAY DIFFRACTION 2.88 Å
Organisms	Homo sapiens
Macromolecule	Histone-lysine N-methyltransferase EZH2 (protein) Polycomb protein EED (protein)
Unique Ligands	LQH

Explore in 3D

5U5H \| pdb_00005u5h	Download File View File

Crystal structure of EED in complex with 6-(2-fluoro-5-methoxybenzyl)-1-isopropyl-5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-3-amine 6-(2-fluoro-5-methoxybenzyl)-1-isopropyl-5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-3-amine

Bussiere, D., Shu, W.

(2017) J Med Chem 60: 415-427

Released	2017-01-11
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Polycomb protein EED (protein)
Unique Ligands	7VV, GOL

Explore in 3D

5U5K \| pdb_00005u5k	Download File View File

Crystal structure of EED in complex with 3-(3-methoxybenzyl)piperidine hydrochloride

Bussiere, D., Shu, W.

(2017) J Med Chem 60: 415-427

Released	2017-01-11
Method	X-RAY DIFFRACTION 2.33 Å
Organisms	Homo sapiens
Macromolecule	Polycomb protein EED (protein)
Unique Ligands	7VY, FMT

Explore in 3D

5U5T \| pdb_00005u5t	Download File View File

Crystal structure of EED in complex with H3K27Me3 peptide and 3-(benzo[d][1,3]dioxol-4-ylmethyl)piperidine-1-carboximidamide

Bussiere, D., Shu, W.

(2017) J Med Chem 60: 415-427

Released	2017-01-11
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Histone-lysine N-methyltransferase EZH2 (protein) Polycomb protein EED (protein)
Unique Ligands	7W7, YT3

Explore in 3D

5U62 \| pdb_00005u62	Download File View File

Crystal structure of EED in complex with H3K27Me3 peptide and 6-(benzo[d][1,3]dioxol-4-ylmethyl)-5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-3-amine

Bussiere, D., Shu, W.

(2017) J Med Chem 60: 415-427

Released	2017-01-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Histone-lysine N-methyltransferase EZH2 (protein) Polycomb protein EED (protein)
Unique Ligands	7WD, GOL, YT3

Explore in 3D

5VAL \| pdb_00005val	Download File View File

BRAF in Complex with N-(3-(tert-butyl)phenyl)-4-methyl-3-(6-morpholinopyrimidin-4-yl)benzamide

Mamo, M., Appleton, B.A.

(2017) J Med Chem 60: 4869-4881

Released	2017-06-28
Method	X-RAY DIFFRACTION 2.26 Å
Organisms	Homo sapiens
Macromolecule	Serine/threonine-protein kinase B-raf (protein)
Unique Ligands	92D

Explore in 3D

5VAM \| pdb_00005vam	Download File View File

BRAF in Complex with RAF709

Mamo, M., Appleton, B.A.

(2017) J Med Chem 60: 4869-4881

Released	2017-06-28
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Serine/threonine-protein kinase B-raf (protein)
Unique Ligands	92J

Explore in 3D

6N0P \| pdb_00006n0p	Download File View File

BRAF in complex with N-(3-(2-(2-hydroxyethoxy)-6-morpholinopyridin-4-yl)-4-methylphenyl)-2-(trifluoromethyl)isonicotinamide (LXH254)

Mamo, M., Appleton, B.A.

(2020) J Med Chem 63: 2013-2027

Released	2019-09-04
Method	X-RAY DIFFRACTION 2.37 Å
Organisms	Homo sapiens
Macromolecule	Serine/threonine-protein kinase B-raf (protein)
Unique Ligands	K81

Explore in 3D

6N0Q \| pdb_00006n0q	Download File View File

BRAF in complex with N-(4-methyl-3-(1-methyl-2-oxo-2,3-dihydro-1H-benzo[d]imidazol-5-yl)phenyl)-3-(trifluoromethyl)benzamide.

Mamo, M., Appleton, B.A.

(2020) J Med Chem 63: 2013-2027

Released	2019-10-23
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Homo sapiens
Macromolecule	Serine/threonine-protein kinase B-raf (protein)
Unique Ligands	K7S

Explore in 3D

7QJG \| pdb_00007qjg	Download File View File

EED in complex with PRC2 allosteric inhibitor compound 6

Zhao, K., Zhao, M., Luo, X., Zhang, H., Scheufler, C.

(2022) J Med Chem 65: 5317-5333

Released	2022-04-13
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Histone-lysine N-methyltransferase EZH2 (protein) Polycomb protein EED (protein)
Unique Ligands	CL, EKR

Explore in 3D

7QJU \| pdb_00007qju	Download File View File

EED in complex with PRC2 allosteric inhibitor compound 7

Zhao, K., Zhao, M., Luo, X., Zhang, H., Scheufler, C.

(2022) J Med Chem 65: 5317-5333

Released	2022-04-13
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	Histone-lysine N-methyltransferase EZH2 (protein) Polycomb protein EED (protein)
Unique Ligands	CL, EKF

Explore in 3D

7QK4 \| pdb_00007qk4	Download File View File

EED in complex with PRC2 allosteric inhibitor compound 22 (MAK683)

Zhao, K., Zhao, M., Luo, X., Zhang, H., Scheufler, C.

(2022) J Med Chem 65: 5317-5333

Released	2022-04-13
Method	X-RAY DIFFRACTION 1.602 Å
Organisms	Homo sapiens
Macromolecule	Histone-lysine N-methyltransferase EZH2 (protein) Polycomb protein EED (protein)
Unique Ligands	CL, EJR

1 to 14 of 14 Structures

Page 1 of 1

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

5H19 | pdb_00005h19

EED in complex with PRC2 allosteric inhibitor EED162

5H24 | pdb_00005h24

EED in complex with PRC2 allosteric inhibitor compound 8

5H25 | pdb_00005h25

EED in complex with PRC2 allosteric inhibitor compound 11

5U5H | pdb_00005u5h

Crystal structure of EED in complex with 6-(2-fluoro-5-methoxybenzyl)-1-isopropyl-5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-3-amine 6-(2-fluoro-5-methoxybenzyl)-1-isopropyl-5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-3-amine

5U5K | pdb_00005u5k

Crystal structure of EED in complex with 3-(3-methoxybenzyl)piperidine hydrochloride

5U5T | pdb_00005u5t

Crystal structure of EED in complex with H3K27Me3 peptide and 3-(benzo[d][1,3]dioxol-4-ylmethyl)piperidine-1-carboximidamide

5U62 | pdb_00005u62

Crystal structure of EED in complex with H3K27Me3 peptide and 6-(benzo[d][1,3]dioxol-4-ylmethyl)-5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-3-amine

5VAL | pdb_00005val

BRAF in Complex with N-(3-(tert-butyl)phenyl)-4-methyl-3-(6-morpholinopyrimidin-4-yl)benzamide

5VAM | pdb_00005vam

BRAF in Complex with RAF709

6N0P | pdb_00006n0p

BRAF in complex with N-(3-(2-(2-hydroxyethoxy)-6-morpholinopyridin-4-yl)-4-methylphenyl)-2-(trifluoromethyl)isonicotinamide (LXH254)

6N0Q | pdb_00006n0q

BRAF in complex with N-(4-methyl-3-(1-methyl-2-oxo-2,3-dihydro-1H-benzo[d]imidazol-5-yl)phenyl)-3-(trifluoromethyl)benzamide.

7QJG | pdb_00007qjg

EED in complex with PRC2 allosteric inhibitor compound 6

7QJU | pdb_00007qju

EED in complex with PRC2 allosteric inhibitor compound 7

7QK4 | pdb_00007qk4

EED in complex with PRC2 allosteric inhibitor compound 22 (MAK683)

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

5H19 | pdb_00005h19

5H24 | pdb_00005h24

5H25 | pdb_00005h25

5U5H | pdb_00005u5h

5U5K | pdb_00005u5k

5U5T | pdb_00005u5t

5U62 | pdb_00005u62

5VAL | pdb_00005val

5VAM | pdb_00005vam

6N0P | pdb_00006n0p

6N0Q | pdb_00006n0q

7QJG | pdb_00007qjg

7QJU | pdb_00007qju

7QK4 | pdb_00007qk4