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234,785 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Dornan, J."

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Search Summary

This query matches 9 Structures.

Refinements

Structure Determination Methodology

experimental (9)

Scientific Name of Source Organism

	Caenorhabditis elegans (3)
	Trypanosoma brucei brucei (3)
	Bos taurus (2)
	Drosophila mauritiana (1)

Taxonomy

Eukaryota (9)

Experimental Method

X-RAY DIFFRACTION (9)

Polymer Entity Type

	Protein (9)
	DNA (1)

Refinement Resolution (Å)

	1.5 - 2.0 (4)
	2.0 - 2.5 (2)
	2.5 - 3.0 (1)
	3.0 - 3.5 (2)

Release Date

	2000 - 2004 (5)
	2015 - 2019 (1)
	2020 - 2024 (3)

Enzyme Classification Name

	Isomerases (5)
	Transferases (3)
	Hydrolases (1)

Symmetry Type

	Asymmetric (5)
	Dihedral (4)
	Cyclic (2)

SCOP Classification

	All beta proteins (5)
	All alpha proteins (2)

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1 to 9 of 9 Structures

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1DYW \| pdb_00001dyw	Download File View File

Biochemical and structural characterization of a divergent loop cyclophilin from Caenorhabditis elegans

Dornan, J., Page, A.P., Taylor, P., Wu, S.Y., Winter, A.D., Husi, H., Walkinshaw, M.D.

(1999) J Biological Chem 274: 34877

Released	2000-06-22
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Caenorhabditis elegans
Macromolecule	CYCLOPHILIN 3 (protein)

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1E3B \| pdb_00001e3b	Download File View File

CYCLOPHILIN 3 FROM C.ELEGANS COMPLEXED WITH AUP(ET)3

Zou, J., Taylor, P., Dornan, J., Robinson, S.P., Walkinshaw, M.D., Sadler, P.J.

(2000) Angew Chem Int Ed Engl 39: 2931

Released	2000-10-22
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Caenorhabditis elegans
Macromolecule	CYCLOPHILIN 3 (protein)
Unique Ligands	3EP, AU

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1E8K \| pdb_00001e8k	Download File View File

Cyclophilin 3 Complexed With Dipeptide Ala-Pro

Wu, S.Y., Dornan, J., Kontopidis, G., Taylor, P., Walkinshaw, M.D.

(2001) Angew Chem Int Ed Engl 40: 582

Released	2001-09-20
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Caenorhabditis elegans
Macromolecule	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3 (protein)
Unique Ligands	ALA, PRO

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1IHG \| pdb_00001ihg	Download File View File

Bovine Cyclophilin 40, monoclinic form

Taylor, P., Dornan, J., Carrello, A., Minchin, R.F., Ratajczak, T., Walkinshaw, M.D.

(2001) Structure 9: 431-438

Released	2001-05-16
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bos taurus
Macromolecule	Cyclophilin 40 (protein)
Unique Ligands	GOL

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1IIP \| pdb_00001iip	Download File View File

Bovine Cyclophilin 40, Tetragonal Form

Taylor, P., Dornan, J., Carrello, A., Minchin, R.F., Ratajczak, T., Walkinshaw, M.D.

(2001) Structure 9: 431-438

Released	2001-05-16
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bos taurus
Macromolecule	Cyclophilin 40 (protein)
Unique Ligands	GOL

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4U7B \| pdb_00004u7b	Download File View File

Crystal structure of a pre-cleavage Mos1 transpososome

Richardson, J.M.

(2015) Nucleic Acids Res 43: 2424-2432

Released	2015-02-11
Method	X-RAY DIFFRACTION 3.09 Å
Organisms	Drosophila mauritiana
Macromolecule	Mariner Mos1 transposase (protein) DNA (25-MER) (nucleic acid) DNA (31-MER) (nucleic acid)
Unique Ligands	SO4

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6QU3 \| pdb_00006qu3	Download File View File

Crystal Structure of Phosphofructokinase from Trypanosoma brucei in complex with an allosteric inhibitor ctcb360

McNae, I.W., Dornan, J., Walkinshaw, M.D.

(2021) Nat Commun 12: 1052-1052

Released	2020-03-18
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	ATP-dependent 6-phosphofructokinase (protein)
Unique Ligands	CIT, GOL, JJ5, SEP

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6QU4 \| pdb_00006qu4	Download File View File

Crystal Structure of Phosphofructokinase from Trypanosoma brucei in complex with an allosteric inhibitor ctcb405

McNae, I.W., Dornan, J., Walkinshaw, M.D.

(2021) Nat Commun 12: 1052-1052

Released	2020-03-18
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	ATP-dependent 6-phosphofructokinase (protein)
Unique Ligands	CIT, GOL, JJ2

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6QU5 \| pdb_00006qu5	Download File View File

Crystal Structure of Phosphofructokinase from Trypanosoma brucei in complex with an allosteric inhibitor ctcb12

McNae, I.W., Dornan, J., Walkinshaw, M.D.

(2021) Nat Commun 12: 1052-1052

Released	2020-03-18
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	ATP-dependent 6-phosphofructokinase (protein)
Unique Ligands	CIT, GOL, JJ8

1 to 9 of 9 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1DYW | pdb_00001dyw

Biochemical and structural characterization of a divergent loop cyclophilin from Caenorhabditis elegans

1E3B | pdb_00001e3b

CYCLOPHILIN 3 FROM C.ELEGANS COMPLEXED WITH AUP(ET)3

1E8K | pdb_00001e8k

Cyclophilin 3 Complexed With Dipeptide Ala-Pro

1IHG | pdb_00001ihg

Bovine Cyclophilin 40, monoclinic form

1IIP | pdb_00001iip

Bovine Cyclophilin 40, Tetragonal Form

4U7B | pdb_00004u7b

Crystal structure of a pre-cleavage Mos1 transpososome

6QU3 | pdb_00006qu3

Crystal Structure of Phosphofructokinase from Trypanosoma brucei in complex with an allosteric inhibitor ctcb360

6QU4 | pdb_00006qu4

Crystal Structure of Phosphofructokinase from Trypanosoma brucei in complex with an allosteric inhibitor ctcb405

6QU5 | pdb_00006qu5

Crystal Structure of Phosphofructokinase from Trypanosoma brucei in complex with an allosteric inhibitor ctcb12

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1DYW | pdb_00001dyw

1E3B | pdb_00001e3b

1E8K | pdb_00001e8k

1IHG | pdb_00001ihg

1IIP | pdb_00001iip

4U7B | pdb_00004u7b

6QU3 | pdb_00006qu3

6QU4 | pdb_00006qu4

6QU5 | pdb_00006qu5