RCSB PDB: Search

3QAZ \| pdb_00003qaz	Download File View File

IL-2 mutant D10 ternary complex

Levin, A.M., Bates, D.L., Ring, A.M., Lin, J.T., Su, L., Krieg, C., Bowman, G.R., Novick, P., Pande, V.S., Khort, H.E., Boyman, O., Gathman, C.G., Garcia, K.C.

(2012) Nature 484: 529-533

Released	2012-04-11
Method	X-RAY DIFFRACTION 3.802 Å
Organisms	Homo sapiens
Macromolecule	Cytokine receptor common subunit gamma (protein) Interleukin-2 (protein) Interleukin-2 receptor subunit beta (protein)
Unique Ligands	NAG

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3QB1 \| pdb_00003qb1	Download File View File

Interleukin-2 mutant D10

Levin, A.M., Bates, D.L., Ring, A.M., Lin, J.T., Su, L., Krieg, C., Bowman, G.R., Novick, P., Pande, V.S., Khort, H.E., Boyman, O., Fathman, C.G., Garcia, K.C.

(2012) Nature 484: 529-533

Released	2012-04-11
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	Interleukin-2 (protein)

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4GS7 \| pdb_00004gs7	Download File View File

Structure of the Interleukin-15 quaternary complex

Ring, A.M., Ozkan, E., Feng, D., Garcia, K.C.

(2012) Nat Immunol 13: 1187-1195

Released	2012-11-07
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Homo sapiens
Macromolecule	Cytokine receptor common subunit gamma (protein) Interleukin-15 (protein) Interleukin-15 receptor subunit alpha (protein) Interleukin-2 receptor subunit beta (protein)
Unique Ligands	ACT, EDO, NAG
Unique branched monosaccharides	NAG

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5IUS \| pdb_00005ius	Download File View File

Crystal structure of human PD-L1 in complex with high affinity PD-1 mutant

Pascolutti, R., Sun, X., Kao, J., Maute, R., Ring, A.M., Bowman, G.R., Kruse, A.C.

(2016) Structure 24: 1719-1728

Released	2016-09-28
Method	X-RAY DIFFRACTION 2.889 Å
Organisms	Homo sapiens
Macromolecule	Programmed cell death 1 ligand 1 (protein) Programmed cell death protein 1 (protein)
Unique Ligands	CL

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5KVH \| pdb_00005kvh	Download File View File

Crystal structure of human apoptosis-inducing factor with W196A mutation

Brosey, C.A., Nix, J., Ellenberger, T., Tainer, J.A.

(2016) Structure 24: 2067-2079

Released	2016-11-16
Method	X-RAY DIFFRACTION 2.273 Å
Organisms	Homo sapiens
Macromolecule	Apoptosis-inducing factor 1, mitochondrial (protein)
Unique Ligands	FAD, GOL

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5KVI \| pdb_00005kvi	Download File View File

Crystal structure of monomeric human apoptosis-inducing factor with E413A/R422A/R430A mutations

Brosey, C.A., Nix, J., Ellenberger, T., Tainer, J.A.

(2016) Structure 24: 2067-2079

Released	2016-11-16
Method	X-RAY DIFFRACTION 1.995 Å
Organisms	Homo sapiens
Macromolecule	Apoptosis-inducing factor 1, mitochondrial (protein)
Unique Ligands	EPE, FAD, GOL

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6B2N \| pdb_00006b2n	Download File View File

Crystal structure of TEM-1 beta-lactamase mutant M182N

Jimah, J.R., Tolia, N.H.

(2017) ACS Cent Sci 3: 1311-1321

Released	2018-01-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	Beta-lactamase TEM (protein)
Unique Ligands	SO4

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6C54 \| pdb_00006c54	Download File View File

Ebola nucleoprotein nucleocapsid-like assembly and the asymmetric unit

Su, Z., Wu, C., Pintilie, G.D., Chiu, W., Amarasinghe, G.K., Leung, D.W.

(2018) Cell 172: 966-978.e12

Released	2018-03-07
Method	ELECTRON MICROSCOPY 5.8 Å
Organisms	Zaire ebolavirus
Macromolecule	Nucleoprotein (protein)

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6NTV \| pdb_00006ntv	Download File View File

SFTSV L endonuclease domain

Wang, W., Amarasinghe, G.K.

(2020) Cell Rep 30: 153-163.e5

Released	2020-01-08
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Severe fever with thrombocytopenia syndrome virus
Macromolecule	RNA polymerase (protein)

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6V5E \| pdb_00006v5e	Download File View File

Crystal structure of CTX-M-14 P167S/D240G beta-lactamase

Brown, C.A., Hu, L., Sankaran, B., Prasad, B.V.V., Palzkill, T.G.

(2020) J Biological Chem 295: 7376-7390

Released	2020-04-22
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	Beta-lactamase (protein)

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6V6G \| pdb_00006v6g	Download File View File

Crystal structure of CTX-M-14 E166A/P167S/D240G beta-lactamase

Brown, C.A., Hu, L., Sankaran, B., Prasad, B.V.V., Palzkill, T.G.

(2020) J Biological Chem 295: 7376-7390

Released	2020-04-22
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Escherichia coli
Macromolecule	Beta-lactamase (protein)
Unique Ligands	NA, PEG

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6V6P \| pdb_00006v6p	Download File View File

Crystal structure of CTX-M-14 E166A/D240G beta-lactamase

Brown, C.A., Hu, L., Sankaran, B., Prasad, B.V.V., Palzkill, T.G.

(2020) J Biological Chem 295: 7376-7390

Released	2020-04-22
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Escherichia coli
Macromolecule	Beta-lactamase (protein)
Unique Ligands	PEG, SO4

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6V7T \| pdb_00006v7t	Download File View File

Crystal structure of CTX-M-14 E166A/D240G beta-lactamase in complex with ceftazidime

Brown, C.A., Hu, L., Sankaran, B., Prasad, B.V.V., Palzkill, T.G.

(2020) J Biological Chem 295: 7376-7390

Released	2020-04-22
Method	X-RAY DIFFRACTION 1.34 Å
Organisms	Escherichia coli
Macromolecule	Beta-lactamase (protein)
Unique Ligands	CAZ

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6V83 \| pdb_00006v83	Download File View File

Crystal structure of CTX-M-14 E166A/P167S/D240G beta-lactamase in complex with ceftazidime-1

Brown, C.A., Hu, L., Sankaran, B., Prasad, B.V.V., Palzkill, T.G.

(2020) J Biological Chem 295: 7376-7390

Released	2020-04-22
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli
Macromolecule	Beta-lactamase (protein)
Unique Ligands	CAZ

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6V8V \| pdb_00006v8v	Download File View File

Crystal structure of CTX-M-14 E166A/P167S/D240G beta-lactamase in complex with ceftazidime-2

Brown, C.A., Hu, L., Sankaran, B., Prasad, B.V.V., Palzkill, T.G.

(2020) J Biological Chem 295: 7376-7390

Released	2020-04-22
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli
Macromolecule	Beta-lactamase (protein)
Unique Ligands	CAZ

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6XRY \| pdb_00006xry	Download File View File

Intrinsically disordered bacterial polar organizing protein Z, PopZ, interacts with protein binding partners through an N-terminal Molecular Recognition Feature

Nordyke, C.T., Ahmed, Y.M., Puterbaugh, R.Z., Bowman, G.R., Varga, K.

(2020) J Mol Biology 432: 6092-6107

Released	2020-11-04
Method	SOLUTION NMR
Organisms	Caulobacter vibrioides CB15
Macromolecule	Polar organizing protein Z (protein)

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7GAV \| pdb_00007gav	Download File View File

Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with MAT-POS-f7918075-2 (SARS2_MproA-x0854)

Fearon, D., Aimon, A., Aschenbrenner, J.C., Balcomb, B.H., Bertram, F.K.R., Brandao-Neto, J., Dias, A., Douangamath, A., Dunnett, L., Godoy, A.S., Gorrie-Stone, T.J., Koekemoer, L., Krojer, T., Lithgo, R.M., Lukacik, P., Marples, P.G., Mikolajek, H., Nelson, E., Owen, C.D., Powell, A.J., Rangel, V.L., Skyner, R., Strain-Damerell, C.M., Thompson, W., Tomlinson, C.W.E., Wild, C., Walsh, M.A., von Delft, F.

(2023) Science 382: eabo7201-eabo7201

Released	2023-11-08
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein)
Unique Ligands	CL, DMS, KFU

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7GAW \| pdb_00007gaw	Download File View File

Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with MAT-POS-e194df51-1 (SARS2_MproA-x0862)

Fearon, D., Aimon, A., Aschenbrenner, J.C., Balcomb, B.H., Bertram, F.K.R., Brandao-Neto, J., Dias, A., Douangamath, A., Dunnett, L., Godoy, A.S., Gorrie-Stone, T.J., Koekemoer, L., Krojer, T., Lithgo, R.M., Lukacik, P., Marples, P.G., Mikolajek, H., Nelson, E., Owen, C.D., Powell, A.J., Rangel, V.L., Skyner, R., Strain-Damerell, C.M., Thompson, W., Tomlinson, C.W.E., Wild, C., Walsh, M.A., von Delft, F.

(2023) Science 382: eabo7201-eabo7201

Released	2023-11-08
Method	X-RAY DIFFRACTION 1.812 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein)
Unique Ligands	CL, DMS, KG9

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7GAX \| pdb_00007gax	Download File View File

Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with GAB-REV-70cc3ca5-4 (Mpro-x10019)

Fearon, D., Aimon, A., Aschenbrenner, J.C., Balcomb, B.H., Bertram, F.K.R., Brandao-Neto, J., Dias, A., Douangamath, A., Dunnett, L., Godoy, A.S., Gorrie-Stone, T.J., Koekemoer, L., Krojer, T., Lithgo, R.M., Lukacik, P., Marples, P.G., Mikolajek, H., Nelson, E., Owen, C.D., Powell, A.J., Rangel, V.L., Skyner, R., Strain-Damerell, C.M., Thompson, W., Tomlinson, C.W.E., Wild, C., Walsh, M.A., von Delft, F.

(2023) Science 382: eabo7201-eabo7201

Released	2023-11-08
Method	X-RAY DIFFRACTION 1.71 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein)
Unique Ligands	DMS, KJI

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7GAY \| pdb_00007gay	Download File View File

Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with BEN-DND-031a96cc-8 (Mpro-x10022)

Fearon, D., Aimon, A., Aschenbrenner, J.C., Balcomb, B.H., Bertram, F.K.R., Brandao-Neto, J., Dias, A., Douangamath, A., Dunnett, L., Godoy, A.S., Gorrie-Stone, T.J., Koekemoer, L., Krojer, T., Lithgo, R.M., Lukacik, P., Marples, P.G., Mikolajek, H., Nelson, E., Owen, C.D., Powell, A.J., Rangel, V.L., Skyner, R., Strain-Damerell, C.M., Thompson, W., Tomlinson, C.W.E., Wild, C., Walsh, M.A., von Delft, F.

(2023) Science 382: eabo7201-eabo7201

Released	2023-11-08
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein)
Unique Ligands	DMS, KJO

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7GAZ \| pdb_00007gaz	Download File View File

Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with DUN-NEW-f8ce3686-14 (Mpro-x10049)

Fearon, D., Aimon, A., Aschenbrenner, J.C., Balcomb, B.H., Bertram, F.K.R., Brandao-Neto, J., Dias, A., Douangamath, A., Dunnett, L., Godoy, A.S., Gorrie-Stone, T.J., Koekemoer, L., Krojer, T., Lithgo, R.M., Lukacik, P., Marples, P.G., Mikolajek, H., Nelson, E., Owen, C.D., Powell, A.J., Rangel, V.L., Skyner, R., Strain-Damerell, C.M., Thompson, W., Tomlinson, C.W.E., Wild, C., Walsh, M.A., von Delft, F.

(2023) Science 382: eabo7201-eabo7201

Released	2023-11-08
Method	X-RAY DIFFRACTION 1.753 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein)
Unique Ligands	DMS, KL6

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7GB0 \| pdb_00007gb0	Download File View File

Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with MAT-POS-c0143b99-1 (Mpro-x10082)

Fearon, D., Aimon, A., Aschenbrenner, J.C., Balcomb, B.H., Bertram, F.K.R., Brandao-Neto, J., Dias, A., Douangamath, A., Dunnett, L., Godoy, A.S., Gorrie-Stone, T.J., Koekemoer, L., Krojer, T., Lithgo, R.M., Lukacik, P., Marples, P.G., Mikolajek, H., Nelson, E., Owen, C.D., Powell, A.J., Rangel, V.L., Skyner, R., Strain-Damerell, C.M., Thompson, W., Tomlinson, C.W.E., Wild, C., Walsh, M.A., von Delft, F.

(2023) Science 382: eabo7201-eabo7201

Released	2023-11-08
Method	X-RAY DIFFRACTION 1.423 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein)
Unique Ligands	DMS, KLR

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7GB1 \| pdb_00007gb1	Download File View File

Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with STE-KUL-2e0d2e88-2 (Mpro-x10150)

Fearon, D., Aimon, A., Aschenbrenner, J.C., Balcomb, B.H., Bertram, F.K.R., Brandao-Neto, J., Dias, A., Douangamath, A., Dunnett, L., Godoy, A.S., Gorrie-Stone, T.J., Koekemoer, L., Krojer, T., Lithgo, R.M., Lukacik, P., Marples, P.G., Mikolajek, H., Nelson, E., Owen, C.D., Powell, A.J., Rangel, V.L., Skyner, R., Strain-Damerell, C.M., Thompson, W., Tomlinson, C.W.E., Wild, C., Walsh, M.A., von Delft, F.

(2023) Science 382: eabo7201-eabo7201

Released	2023-11-08
Method	X-RAY DIFFRACTION 1.289 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein)
Unique Ligands	DMS, KMF

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7GB2 \| pdb_00007gb2	Download File View File

Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with MED-COV-4280ac29-25 (Mpro-x10155)

Fearon, D., Aimon, A., Aschenbrenner, J.C., Balcomb, B.H., Bertram, F.K.R., Brandao-Neto, J., Dias, A., Douangamath, A., Dunnett, L., Godoy, A.S., Gorrie-Stone, T.J., Koekemoer, L., Krojer, T., Lithgo, R.M., Lukacik, P., Marples, P.G., Mikolajek, H., Nelson, E., Owen, C.D., Powell, A.J., Rangel, V.L., Skyner, R., Strain-Damerell, C.M., Thompson, W., Tomlinson, C.W.E., Wild, C., Walsh, M.A., von Delft, F.

(2023) Science 382: eabo7201-eabo7201

Released	2023-11-08
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein)
Unique Ligands	DMS, KMX

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7GB3 \| pdb_00007gb3	Download File View File

Group deposition SARS-CoV-2 main protease in complex with inhibitors from the COVID Moonshot -- Crystal Structure of SARS-CoV-2 main protease in complex with DAV-CRI-3edb475e-6 (Mpro-x10172)

Fearon, D., Aimon, A., Aschenbrenner, J.C., Balcomb, B.H., Bertram, F.K.R., Brandao-Neto, J., Dias, A., Douangamath, A., Dunnett, L., Godoy, A.S., Gorrie-Stone, T.J., Koekemoer, L., Krojer, T., Lithgo, R.M., Lukacik, P., Marples, P.G., Mikolajek, H., Nelson, E., Owen, C.D., Powell, A.J., Rangel, V.L., Skyner, R., Strain-Damerell, C.M., Thompson, W., Tomlinson, C.W.E., Wild, C., Walsh, M.A., von Delft, F.

(2023) Science 382: eabo7201-eabo7201

Released	2023-11-08
Method	X-RAY DIFFRACTION 1.379 Å
Organisms	Severe acute respiratory syndrome coronavirus 2
Macromolecule	3C-like proteinase (protein)
Unique Ligands	DMS, KNU

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

3QAZ | pdb_00003qaz

3QB1 | pdb_00003qb1

4GS7 | pdb_00004gs7

5IUS | pdb_00005ius

5KVH | pdb_00005kvh

5KVI | pdb_00005kvi

6B2N | pdb_00006b2n

6C54 | pdb_00006c54

6NTV | pdb_00006ntv

6V5E | pdb_00006v5e

6V6G | pdb_00006v6g

6V6P | pdb_00006v6p

6V7T | pdb_00006v7t

6V83 | pdb_00006v83

6V8V | pdb_00006v8v

6XRY | pdb_00006xry

7GAV | pdb_00007gav

7GAW | pdb_00007gaw

7GAX | pdb_00007gax

7GAY | pdb_00007gay

7GAZ | pdb_00007gaz

7GB0 | pdb_00007gb0

7GB1 | pdb_00007gb1

7GB2 | pdb_00007gb2

7GB3 | pdb_00007gb3