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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Bazzo, N.L."

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Search Summary

This query matches 56 Structures.

Refinements

Structure Determination Methodology

experimental (56)

Scientific Name of Source Organism

	Homo sapiens (14)
	Crithidia fasciculata (6)
	Arabidopsis thaliana (4)
	Artocarpus integer (4)
	Yersinia pseudotuberculosis YPIII (4)
	Yersinia pseudotuberculosis (3)
	Ascaris suum (2)
	Campylobacter jejuni (2)
	Escherichia coli (2)
	Escherichia coli K-12 (2)

More...

Taxonomy

	Eukaryota (37)
	Bacteria (17)
	Riboviria (3)

Experimental Method

	X-RAY DIFFRACTION (51)
	ELECTRON MICROSCOPY (3)
	SOLUTION NMR (2)

Polymer Entity Type

Protein (56)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (21)
	2.0 - 2.5 (19)
	2.5 - 3.0 (6)
	3.0 - 3.5 (4)
	3.5 - 4.0 (1)

Release Date

	2000 - 2004 (9)
	2005 - 2009 (2)
	2010 - 2014 (17)
	2015 - 2019 (15)
	2020 - 2024 (11)
	2025 - 2029 (2)

Enzyme Classification Name

	Oxidoreductases (13)
	Transferases (18)
	Ligases (2)
	Lyases (2)
	Isomerases (1)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Cyclic (21)
	Asymmetric (22)
	Dihedral (11)
	Icosahedral (2)

SCOP Classification

	Alpha and beta proteins (a+b) (10)
	Alpha and beta proteins (a/b) (21)
	Artifacts (13)
	All beta proteins (3)
	Multi-domain proteins (alpha and beta) (1)
	All alpha proteins (1)
	Small proteins (1)

AllSelected

1 to 25 of 56 Structures

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1O73 \| pdb_00001o73	Download File View File

Tryparedoxin from Trypanosoma brucei

Gabrielsen, M., Alphey, M.S., Bond, C.S., Hunter, W.N.

(2003) J Biological Chem 278: 25919

Released	2003-04-24
Method	X-RAY DIFFRACTION 2.28 Å
Organisms	Trypanosoma brucei brucei
Macromolecule	TRYPAREDOXIN (protein)

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1O7U \| pdb_00001o7u	Download File View File

Radiation induced tryparedoxin-I

Alphey, M.S., Bond, C.S., McSweeney, S.M., Hunter, W.N.

(2003) J Biological Chem 278: 25919

Released	2003-04-24
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Crithidia fasciculata
Macromolecule	TRYPAREDOXIN (protein)

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1O85 \| pdb_00001o85	Download File View File

Radiation-reduced Tryparedoxin-I

Alphey, M.S., Bond, C.S., Hunter, W.N.

(2003) J Biological Chem 278: 25919

Released	2003-04-24
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Crithidia fasciculata
Macromolecule	TRYPAREDOXIN (protein)

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1O8W \| pdb_00001o8w	Download File View File

Radiation-reduced Tryparedoxin-I

Alphey, M.S., Bond, C.S., Hunter, W.N.

(2003) J Biological Chem 278: 25919

Released	2003-08-01
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Crithidia fasciculata
Macromolecule	TRYPAREDOXIN (protein)

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1O8X \| pdb_00001o8x	Download File View File

Mutant tryparedoxin-I Cys43Ala

Alphey, M.S., Bond, C.S., Hunter, W.N.

(2003) J Biological Chem 278: 25919

Released	2003-04-24
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Crithidia fasciculata
Macromolecule	TRYPAREDOXIN (protein)

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1OC8 \| pdb_00001oc8	Download File View File

TRYPAREDOXIN II FROM C.FASCICULATA SOLVED BY MR

Leonard, G.A., Micossi, E., Hunter, W.N.

(2003) J Biological Chem 278: 25919

Released	2003-04-02
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Crithidia fasciculata
Macromolecule	TRYPAREDOXIN II (protein)
Unique Ligands	SO4

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1OC9 \| pdb_00001oc9	Download File View File

TRYPAREDOXIN II FROM C.FASCICULATA solved by MR

Leonard, G.A., Micossi, E., Hunter, W.N.

(2003) J Biological Chem 278: 25919

Released	2003-03-20
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Crithidia fasciculata
Macromolecule	TRYPAREDOXIN II (protein)

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1W55 \| pdb_00001w55	Download File View File

Structure of the Bifunctional IspDF from Campylobacter jejuni

Gabrielsen, M., Bond, C.S., Hunter, W.N.

(2004) J Biological Chem 279: 52753

Released	2004-10-04
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Campylobacter jejuni
Macromolecule	ISPD/ISPF BIFUNCTIONAL ENZYME (protein)
Unique Ligands	C, EDO, GPP, MG

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1W57 \| pdb_00001w57	Download File View File

Structure of the Bifunctional IspDF from Campylobacter jejuni containing Zn

Gabrielsen, M., Bond, C.S., Hunter, W.N.

(2004) J Biological Chem 279: 52753

Released	2004-10-04
Method	X-RAY DIFFRACTION 3.09 Å
Organisms	Campylobacter jejuni
Macromolecule	ISPD/ISPF BIFUNCTIONAL ENZYME (protein)
Unique Ligands	C5P, GPP, ZN

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1W77 \| pdb_00001w77	Download File View File

2C-methyl-D-erythritol 4-phosphate cytidylyltransferase (IspD) from Arabidopsis thaliana

Gabrielsen, M., Kaiser, J., Rohdich, F., Eisenreich, W., Bacher, A., Bond, C.S., Hunter, W.N.

(2006) FEBS J 273: 1065

Released	2006-02-21
Method	X-RAY DIFFRACTION 2 Å
Organisms	Arabidopsis thaliana
Macromolecule	2C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE (protein)
Unique Ligands	C5P, CD, CU

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2C0D \| pdb_00002c0d	Download File View File

Structure of the mitochondrial 2-cys peroxiredoxin from Plasmodium falciparum

Boucher, I.W., Brannigan, J.A., Wilkinson, A.J., Brzozowski, A.M., Muller, S.

(2006) Mol Microbiol 61: 948

Released	2006-11-21
Method	X-RAY DIFFRACTION 1.78 Å
Organisms	Plasmodium falciparum 3D7
Macromolecule	THIOREDOXIN PEROXIDASE 2 (protein)

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2WW4 \| pdb_00002ww4	Download File View File

a triclinic crystal form of E. coli 4-diphosphocytidyl-2C-methyl-D- erythritol kinase

Kalinowska-Tluscik, J., Miallau, L., Gabrielsen, M., Leonard, G.A., McSweeney, S.M., Hunter, W.N.

(2010) Acta Crystallogr Sect F Struct Biol Cryst Commun 66: 237

Released	2010-03-09
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	4-DIPHOSPHOCYTIDYL-2C-METHYL-D-ERYTHRITOL KINASE (protein)
Unique Ligands	ADP, GOL

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2XPD \| pdb_00002xpd	Download File View File

Reduced Thiol peroxidase (Tpx) from yersinia Pseudotuberculosis

Gabrielsen, M., Zetterstrom, C.E., Wang, D., Elofsson, M., Roe, A.J.

(2012) PLoS One 7: 32217

Released	2011-06-29
Method	X-RAY DIFFRACTION 2 Å
Organisms	Yersinia pseudotuberculosis YPIII
Macromolecule	THIOL PEROXIDASE (protein)
Unique Ligands	DTU

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2XPE \| pdb_00002xpe	Download File View File

Oxidised Thiol peroxidase (Tpx) from Yersinia pseudotuberculosis

Gabrielsen, M., Zetterstrom, C.E., Wang, D., Elofsson, M., Roe, A.J.

(2012) PLoS One 7: 32217

Released	2011-08-10
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Yersinia pseudotuberculosis YPIII
Macromolecule	THIOL PEROXIDASE (protein)

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2YC3 \| pdb_00002yc3	Download File View File

Inhibitors of the herbicidal target IspD

Hoeffken, H.W.

(2011) Angew Chem Int Ed Engl 50: 7931

Released	2011-08-24
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Arabidopsis thaliana
Macromolecule	2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTIC (protein)
Unique Ligands	CD, CU, MW5, NA

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2YC5 \| pdb_00002yc5	Download File View File

Inhibitors of the herbicidal target IspD

Hoeffken, H.W.

(2011) Angew Chem Int Ed Engl 50: 7931

Released	2011-08-24
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Arabidopsis thaliana
Macromolecule	2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTIC (protein)
Unique Ligands	6BC, ACT, CD, CU, MG, NA, ZN

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2YCM \| pdb_00002ycm	Download File View File

Inhibitors of herbicidal target IspD

Hoeffken, H.W.

(2011) Angew Chem Int Ed Engl 50: 7931

Released	2011-08-24
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Arabidopsis thaliana
Macromolecule	2-C-METHYL-D-ERYTHRITOL 4-PHOSPHATE CYTIDYLYLTRANSFERASE, CHLOROPLASTIC (protein)
Unique Ligands	30A, CD, CU, NA

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2YJH \| pdb_00002yjh	Download File View File

Thiol Peroxidase from Yersinia Psuedotuberculosis, inactive mutant C61S

Beckham, K.S.H., Gabrielsen, M., Wang, D., Roe, A.J.

(2012) PLoS One 7: 32217

Released	2012-03-14
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Yersinia pseudotuberculosis
Macromolecule	THIOL PEROXIDASE (protein)

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3ZRD \| pdb_00003zrd	Download File View File

Oxidised Thiol peroxidase (Tpx) from Yersinia pseudotuberculosis

Gabrielsen, M., Zetterstrom, C.E., Wang, D., Elofsson, M., Roe, A.J.

(2012) PLoS One 7: 32217

Released	2012-03-14
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Yersinia pseudotuberculosis YPIII
Macromolecule	THIOL PEROXIDASE (protein)

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3ZRE \| pdb_00003zre	Download File View File

Reduced Thiol peroxidase (Tpx) from yersinia Pseudotuberculosis

Gabrielsen, M., Zetterstrom, C.E., Wang, D., Elofsson, M., Roe, A.J.

(2012) PLoS One 7: 32217

Released	2012-03-14
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Yersinia pseudotuberculosis YPIII
Macromolecule	THIOL PEROXIDASE (protein)

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4AEY \| pdb_00004aey	Download File View File

Crystal structure of FolX from Pseudomonas aeruginosa

Gabrielsen, M., Beckham, K.S.H., Roe, A.J.

(2012) FEBS Lett 586: 1160

Released	2012-03-21
Method	X-RAY DIFFRACTION 3 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	D-ERYTHRO-7,8-DIHYDRONEOPTERIN TRIPHOSPHATE EPIMERASE (protein)

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4AF2 \| pdb_00004af2	Download File View File

C61S mutant of thiol peroxidase form E. coli.

Beckham, K.S.H., Roe, A.J., Byron, O., Gabrielsen, M.

(2012) Acta Crystallogr Sect F Struct Biol Cryst Commun 68: 522

Released	2012-05-02
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Escherichia coli
Macromolecule	THIOL PEROXIDASE (protein)

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4AK4 \| pdb_00004ak4	Download File View File

High resolution structure of Galactose Binding lectin from Champedak (CGB)

Gabrielsen, M., Abdul-Rahman, P.S., Othman, S., Hashim, O.H., Cogdell, R.J.

(2014) Acta Crystallogr Sect F Struct Biol Cryst Commun 70: 709

Released	2013-02-27
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Artocarpus integer
Macromolecule	AGGLUTININ ALPHA CHAIN (protein) AGGLUTININ BETA-4 CHAIN (protein)
Unique Ligands	P6G

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4AKB \| pdb_00004akb	Download File View File

Structure of Galactose Binding lectin from Champedak (CGB) with Galactose

Gabrielsen, M., Abdul-Rahman, P.S., Othman, S., Hashim, O.H., Cogdell, R.J.

(2014) Acta Crystallogr Sect F Struct Biol Cryst Commun 70: 709

Released	2013-02-27
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Artocarpus integer
Macromolecule	AGGLUTININ ALPHA CHAIN (protein) AGGLUTININ BETA-4 CHAIN (protein)
Unique Ligands	GAL, P6G

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4AKC \| pdb_00004akc	Download File View File

Structure of Galactose Binding lectin from Champedak (CGB) with Gal(beta)1,3-GalNac

Gabrielsen, M., Abdul-Rahman, P.S., Othman, S., Hashim, O.H., Cogdell, R.J.

(2014) Acta Crystallogr Sect F Struct Biol Cryst Commun 70: 709

Released	2013-02-27
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Artocarpus integer
Macromolecule	AGGLUTININ ALPHA CHAIN (protein) AGGLUTININ BETA-4 CHAIN (protein)
Unique branched monosaccharides	A2G, GAL

1 to 25 of 56 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1O73 | pdb_00001o73

1O7U | pdb_00001o7u

1O85 | pdb_00001o85

1O8W | pdb_00001o8w

1O8X | pdb_00001o8x

1OC8 | pdb_00001oc8

1OC9 | pdb_00001oc9

1W55 | pdb_00001w55

1W57 | pdb_00001w57

1W77 | pdb_00001w77

2C0D | pdb_00002c0d

2WW4 | pdb_00002ww4

2XPD | pdb_00002xpd

2XPE | pdb_00002xpe

2YC3 | pdb_00002yc3

2YC5 | pdb_00002yc5

2YCM | pdb_00002ycm

2YJH | pdb_00002yjh

3ZRD | pdb_00003zrd

3ZRE | pdb_00003zre

4AEY | pdb_00004aey

4AF2 | pdb_00004af2

4AK4 | pdb_00004ak4

4AKB | pdb_00004akb

4AKC | pdb_00004akc