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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Barnett, B.L."

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Search Summary

This query matches 33 Structures.

Refinements

Structure Determination Methodology

experimental (33)

Scientific Name of Source Organism

	Homo sapiens (22)
	Escherichia coli K-12 (9)
	Bacillus amyloliquefaciens (1)
	Thermus aquaticus (1)

Taxonomy

	Eukaryota (22)
	Bacteria (11)

Experimental Method

X-RAY DIFFRACTION (33)

Polymer Entity Type

Protein (33)

Refinement Resolution (Å)

	1.0 - 1.5 (8)
	1.5 - 2.0 (11)
	2.0 - 2.5 (13)
	2.5 - 3.0 (1)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (2)
	2000 - 2004 (1)
	2005 - 2009 (12)
	2010 - 2014 (14)
	2015 - 2019 (3)

Enzyme Classification Name

	Transferases (19)
	Hydrolases (14)

Symmetry Type

	Cyclic (21)
	Asymmetric (13)

SCOP Classification

	All alpha proteins (18)
	Alpha and beta proteins (a+b) (12)
	Alpha and beta proteins (a/b) (2)

AllSelected

1 to 25 of 33 Structures

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1B3D \| pdb_00001b3d	Download File View File

STROMELYSIN-1

Chen, L., Rydel, T.J., Dunaway, C.M., Pikul, S., Dunham, K.M., Gu, F., Barnett, B.L.

(1999) J Mol Biology 293: 545-557

Released	1999-12-10
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	STROMELYSIN-1 (protein)
Unique Ligands	CA, S27, ZN

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1BIW \| pdb_00001biw	Download File View File

DESIGN AND SYNTHESIS OF CONFORMATIONALLY-CONSTRAINED MMP INHIBITORS

Natchus, M.G., Cheng, M., Wahl, C.T., Pikul, S., Almstead, N.G., Bradley, R.S., Taiwo, Y.O., Mieling, G.E., Dunaway, C.M., Snider, C.E., McIver, J.M., Barnett, B.L., McPhail, S.J., Anastasio, M.B., De, B.

(1998) Bioorg Med Chem Lett 8: 2077-2080

Released	1999-07-16
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	PROTEIN (STROMELYSIN-1 COMPLEX) (protein)
Unique Ligands	CA, S80, ZN

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1CQR \| pdb_00001cqr	Download File View File

CRYSTAL STRUCTURE OF THE STROMELYSIN CATALYTIC DOMAIN AT 2.0 A RESOLUTION

Chen, L., Rydel, T.J., Gu, F., Dunaway, C.M., Pikul, S., Dunham, K.M., Barnett, B.L.

(1999) J Mol Biology 293: 545-557

Released	2000-03-20
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	STROMELYSIN-1 (protein)
Unique Ligands	CA, ZN

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1S02 \| pdb_00001s02	Download File View File

EFFECTS OF ENGINEERED SALT BRIDGES ON THE STABILITY OF SUBTILISIN BPN'

Erwin, C.R., Barnett, B.L., Oliver, J.D., Sullivan, J.F.

(1990) Protein Eng 4: 87-97

Released	1992-01-15
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Bacillus amyloliquefaciens
Macromolecule	SUBTILISIN BPN' (protein)
Unique Ligands	CA, SO4

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2GG0 \| pdb_00002gg0	Download File View File

Novel bacterial methionine aminopeptidase inhibitors

Evdokimov, A.G., Pokross, M.E., Walter, R.L., Mekel, M.

(2007) Proteins 66: 538-546

Released	2006-06-13
Method	X-RAY DIFFRACTION 1.28 Å
Organisms	Escherichia coli K-12
Macromolecule	Methionine aminopeptidase (protein)
Unique Ligands	CO, NA, U11

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2GG2 \| pdb_00002gg2	Download File View File

Novel bacterial methionine aminopeptidase inhibitors

Evdokimov, A.G., Pokross, M.E., Walter, R.L., Mekel, M.

(2007) Proteins 66: 538-546

Released	2006-06-13
Method	X-RAY DIFFRACTION 1 Å
Organisms	Escherichia coli K-12
Macromolecule	Methionine aminopeptidase (protein)
Unique Ligands	CO, NA, U12

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2GG3 \| pdb_00002gg3	Download File View File

Novel bacterial methionine aminopeptidase inhibitors

Evdokimov, A.G., Pokross, M.E., Walter, R.L., Mekel, M.

(2007) Proteins 66: 538-546

Released	2006-06-13
Method	X-RAY DIFFRACTION 1.45 Å
Organisms	Escherichia coli K-12
Macromolecule	Methionine aminopeptidase (protein)
Unique Ligands	CO, NA, U13

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2GG5 \| pdb_00002gg5	Download File View File

Novel bacterial methionine aminopeptidase inhibitors

Evdokimov, A.G., Pokross, M.E., Walter, R.L., Mekel, M.

(2007) Proteins 66: 538-546

Released	2006-06-13
Method	X-RAY DIFFRACTION 2.12 Å
Organisms	Escherichia coli K-12
Macromolecule	Methionine aminopeptidase (protein)
Unique Ligands	CO, NA, U19

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2GG7 \| pdb_00002gg7	Download File View File

Novel bacterial methionine aminopeptidase inhibitors

Evdokimov, A.G., Pokross, M.E., Walter, R.L., Mekel, M.

(2007) Proteins 66: 538-546

Released	2006-06-13
Method	X-RAY DIFFRACTION 1.12 Å
Organisms	Escherichia coli K-12
Macromolecule	Methionine aminopeptidase (protein)
Unique Ligands	CO, NA, U14

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2GG8 \| pdb_00002gg8	Download File View File

Novel bacterial methionine aminopeptidase inhibitors

Evdokimov, A.G., Pokross, M.E., Walter, R.L., Mekel, M.

(2007) Proteins 66: 538-546

Released	2006-06-13
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli K-12
Macromolecule	Methionine aminopeptidase (protein)
Unique Ligands	CO, NA, U15

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2GG9 \| pdb_00002gg9	Download File View File

Novel bacterial methionine aminopeptidase inhibitors

Evdokimov, A.G., Pokross, M.E., Walter, R.L., Mekel, M.

(2007) Proteins 66: 538-546

Released	2006-06-13
Method	X-RAY DIFFRACTION 1.05 Å
Organisms	Escherichia coli K-12
Macromolecule	Methionine aminopeptidase (protein)
Unique Ligands	CO, NA, U16

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2GGB \| pdb_00002ggb	Download File View File

Novel bacterial methionine aminopeptidase inhibitors

Evdokimov, A.G., Pokross, M.E., Walter, R.L., Mekel, M.

(2007) Proteins 66: 538-546

Released	2006-06-13
Method	X-RAY DIFFRACTION 2.13 Å
Organisms	Escherichia coli K-12
Macromolecule	Methionine aminopeptidase (protein)
Unique Ligands	CO, NA, U17

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2GGC \| pdb_00002ggc	Download File View File

Novel bacterial methionine aminopeptidase inhibitors

Evdokimov, A.G., Pokross, M.E., Walter, R.L., Mekel, M.

(2007) Proteins 66: 538-546

Released	2006-06-13
Method	X-RAY DIFFRACTION 1 Å
Organisms	Escherichia coli K-12
Macromolecule	Methionine aminopeptidase (protein)
Unique Ligands	CO, MET, NA

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2RAH \| pdb_00002rah	Download File View File

Human FDPS synthase in complex with novel inhibitor

Evdokimov, A.G., Barnett, B.L., Ebetino, F.H., Pokross, M.

To be published

Released	2007-09-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthetase (protein)
Unique Ligands	11P, MG, SO4

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2VF6 \| pdb_00002vf6	Download File View File

Human FDPS synthase in complex with minodronate

Evdokimov, A.G., Barnett, B.L., Ebetino, F.H., Pokross, M.

To be published

Released	2007-11-06
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	FARNESYL PYROPHOSPHATE SYNTHETASE (protein)
Unique Ligands	M0N, MG

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3CP6 \| pdb_00003cp6	Download File View File

Crystal structure of human farnesyl diphosphate synthase (T201A mutant) complexed with Mg and biphosphonate inhibitor

Pilka, E.S., Dunford, J.E., Guo, K., Pike, A.C.W., von Delft, F., Barnett, B.L., Ebetino, F.H., Arrowsmith, C.H., Bountra, C., Edwards, A.M., Russell, R.G.G., Oppermann, U., Structural Genomics Consortium (SGC)

To be published

Released	2008-04-15
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthetase (protein)
Unique Ligands	MG, RSX

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3RYE \| pdb_00003rye	Download File View File

Human FDPS Synthase in Complex with a N-Methyl Pyridinum Bisphosphonate

Evdokimov, A.G., Barnett, B.L., Ebetino, F.H., Pokross, M.

To be published

Released	2011-06-01
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	MG, SO4, UNR

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3S4J \| pdb_00003s4j	Download File View File

Human FDPS Synthase in Complex with a Rigid Analog of Risedronate

Evdokimov, A.G., Barnett, B.L., Ebetino, F.H., Pokross, M.

To be published

Released	2011-06-29
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	MG, SO4, UNV

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4DZT \| pdb_00004dzt	Download File View File

Aqualysin I: the crystal structure of a serine protease from an extreme thermophile, Thermus aquaticus YT-1

Barnett, B.L., Green, P.R., Strickland, L.C., Oliver, J.D., Rydel, T., Sullivan, J.F.

To be published

Released	2012-03-28
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Thermus aquaticus
Macromolecule	Aqualysin-1 (protein)
Unique Ligands	CA, PMS

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4KFA \| pdb_00004kfa	Download File View File

Crystal structure of human farnesyl pyrophosphate synthase (t201a mutant) complexed with mg and zoledronate

Barnett, B.L., Tsoumpra, M.K., Muniz, J.R.C., Walter, R.L.

To be published

Released	2014-04-30
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	EDO, MG, ZOL

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4KPD \| pdb_00004kpd	Download File View File

Crystal Structure of Human Farnesyl Pyrophosphate Synthase (Y204F) Mutant Complexed with Mg, Risedronate and Isopentenyl Pyrophosphate

Barnett, B.L., Tsoumpra, M.K., Muniz, J.R.C., Walter, R.L.

To be published

Released	2014-04-30
Method	X-RAY DIFFRACTION 1.96 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	IPE, MG, RIS

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4KPJ \| pdb_00004kpj	Download File View File

Crystal Structure of Farnesyl Pyrophosphate Synthase (Y204A) Mutant complexed with Mg, Pamidronate

Barnett, B.L., Tsoumpra, M.K., Muniz, J.R.C., Walter, R.L.

To be published

Released	2014-04-30
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	210, EDO, MG

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4KQ5 \| pdb_00004kq5	Download File View File

Crystal Structure of Human Farnesyl Pyrophosphate Synthase Mutant (Y204A) Complexed with Mg and Zoledronate

Barnett, B.L., Tsoumpra, M.K., Muniz, J.R.C.

To be published

Released	2014-04-30
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	EDO, MG, ZOL

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4KQS \| pdb_00004kqs	Download File View File

Crystal Structure of Farnesyl Pyrophosphate Synthase Mutant (Y204A) Complexed with Mg, Risedronate and Isopentenyl Pyrophosphate

Barnett, B.L., Tsoumpra, M.K., Muniz, J.R.C.

To be published

Released	2014-04-30
Method	X-RAY DIFFRACTION 1.97 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	IPE, MG, RIS

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4KQU \| pdb_00004kqu	Download File View File

Crystal Structure of Farnesyl Synthase Mutant (Y204A) Complexed with Mg, Alendronate and Isopentenyl Pyrophosphate

Barnett, B.L., Tsoumpra, M.K., Muniz, J.R.C., Walter, R.L.

To be published

Released	2014-04-30
Method	X-RAY DIFFRACTION 2.07 Å
Organisms	Homo sapiens
Macromolecule	Farnesyl pyrophosphate synthase (protein)
Unique Ligands	AHD, IPE, MG

1 to 25 of 33 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1B3D | pdb_00001b3d

1BIW | pdb_00001biw

1CQR | pdb_00001cqr

1S02 | pdb_00001s02

2GG0 | pdb_00002gg0

2GG2 | pdb_00002gg2

2GG3 | pdb_00002gg3

2GG5 | pdb_00002gg5

2GG7 | pdb_00002gg7

2GG8 | pdb_00002gg8

2GG9 | pdb_00002gg9

2GGB | pdb_00002ggb

2GGC | pdb_00002ggc

2RAH | pdb_00002rah

2VF6 | pdb_00002vf6

3CP6 | pdb_00003cp6

3RYE | pdb_00003rye

3S4J | pdb_00003s4j

4DZT | pdb_00004dzt

4KFA | pdb_00004kfa

4KPD | pdb_00004kpd

4KPJ | pdb_00004kpj

4KQ5 | pdb_00004kq5

4KQS | pdb_00004kqs

4KQU | pdb_00004kqu