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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Wei, J."

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Search Summary

This query matches 29 Structures.

Refinements

Structure Determination Methodology

experimental (29)

Scientific Name of Source Organism

	Streptomyces hygroscopicus (9)
	Homo sapiens (8)
	Saccharomyces cerevisiae S288C (6)
	Escherichia coli DH5[alpha] (2)
	Arabidopsis thaliana (1)
	Escherichia coli K-12 (1)
	Staphylococcus aureus subsp. aureus MSSA476 (1)
	Trypanosoma cruzi (1)

Taxonomy

	Eukaryota (16)
	Bacteria (13)

Experimental Method

	X-RAY DIFFRACTION (22)
	ELECTRON MICROSCOPY (6)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (29)
	DNA (2)
	RNA (2)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (4)
	2.0 - 2.5 (7)
	2.5 - 3.0 (9)
	3.0 - 3.5 (4)
	3.5 - 4.0 (3)

Release Date

	2005 - 2009 (2)
	2010 - 2014 (4)
	2015 - 2019 (10)
	2020 - 2024 (11)
	2025 - 2029 (2)

Enzyme Classification Name

	Ligases (6)
	Transferases (3)
	Hydrolases (3)

Symmetry Type

	Asymmetric (13)
	Cyclic (16)
	Dihedral (1)

SCOP Classification

	All alpha proteins (2)
	Alpha and beta proteins (a/b) (1)
	All beta proteins (1)
	Artifacts (1)

AllSelected

1 to 25 of 29 Structures

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2K6S \| pdb_00002k6s	Download File View File

Structure of Rab11-FIP2 C-terminal Coiled-coil Domain

Wei, J., Liu, Y., Baleja, J.D.

(2009) Biochemistry 48: 549-557

Released	2009-06-16
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Rab11fip2 protein (protein)

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3JUI \| pdb_00003jui	Download File View File

Crystal Structure of the C-terminal Domain of Human Translation Initiation Factor eIF2B epsilon Subunit

Wei, J., Xu, H., Zhang, C., Wang, M., Gao, F., Gong, W.

To be published

Released	2009-10-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Translation initiation factor eIF-2B subunit epsilon (protein)
Unique Ligands	GOL

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4DZD \| pdb_00004dzd	Download File View File

Crystal structure of the CRISPR-associated protein Cas6e from Escherichia coli str. K-12

Wei, J., Huang, G., Wang, Y., Gong, W.

To be published

Released	2013-03-06
Method	X-RAY DIFFRACTION 1.999 Å
Organisms	Escherichia coli K-12
Macromolecule	Uncharacterized protein ygcH (protein)
Unique Ligands	GOL

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4FYP \| pdb_00004fyp	Download File View File

Crystal Structure of Plant Vegetative Storage Protein

Chen, Y., Wei, J., Wang, M., Gong, W., Zhang, M.

(2012) PLoS One 7: e49421-e49421

Released	2013-06-26
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Arabidopsis thaliana
Macromolecule	Vegetative storage protein 1 (protein)
Unique Ligands	MG

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4HCB \| pdb_00004hcb	Download File View File

The metal-free form of crystal structure of E.coli ExoI-ssDNA complex

Qiu, R., Wei, J., Lou, T., Liu, M., Ji, C., Gong, W.

To be published

Released	2013-10-09
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli DH5[alpha]
Macromolecule	Exodeoxyribonuclease I (protein) DNA (5'-D(APAPAPAPAPAPAPAPAPAPAPA)-3') (nucleic acid)
Unique Ligands	GOL, SO4

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4HCC \| pdb_00004hcc	Download File View File

The zinc ion bound form of crystal structure of E.coli ExoI-ssDNA complex

Qiu, R., Wei, J., Lou, T., Liu, M., Ji, C., Gong, W.

To be published

Released	2013-10-09
Method	X-RAY DIFFRACTION 2.96 Å
Organisms	Escherichia coli DH5[alpha]
Macromolecule	Exodeoxyribonuclease I (protein) DNA (5'-D(APAPAPAPAPAPAPAPAPAPAPA)-3') (nucleic acid)
Unique Ligands	IPA, PO4, SO4, ZN

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5CS0 \| pdb_00005cs0	Download File View File

Crystal structure of domains AC1-AC2 of yeast acetyl-CoA carboxylase

Wei, J., Tong, L.

(2015) Nature 526: 723-727

Released	2015-10-28
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Acetyl-CoA carboxylase (protein)

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5CS4 \| pdb_00005cs4	Download File View File

Crystal structure of domains AC3-AC5 of yeast acetyl-CoA carboxylase

Wei, J., Tong, L.

(2015) Nature 526: 723-727

Released	2015-10-28
Method	X-RAY DIFFRACTION 3.19 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Acetyl-CoA carboxylase (protein)

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5CSA \| pdb_00005csa	Download File View File

Crystal structure of domains BT-BCCP-AC1-AC5 of yeast acetyl-CoA carboxylase

Wei, J., Tong, L.

(2015) Nature 526: 723-727

Released	2015-10-28
Method	X-RAY DIFFRACTION 3 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Acetyl-CoA carboxylase (protein)

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5CSK \| pdb_00005csk	Download File View File

Crystal structure of yeast acetyl-CoA carboxylase, unbiotinylated

Wei, J., Tong, L.

(2015) Nature 526: 723-727

Released	2015-10-28
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Acetyl-CoA carboxylase (protein)

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5CSL \| pdb_00005csl	Download File View File

Crystal structure of the 500 kD yeast acetyl-CoA carboxylase holoenzyme dimer

Wei, J., Tong, L.

(2015) Nature 526: 723-727

Released	2015-10-28
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Acetyl-CoA carboxylase (protein)
Unique Ligands	BTI, COA

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5HWL \| pdb_00005hwl	Download File View File

Human glutathione s-transferase Mu2 complexed with BDEA, monoclinic crystal form

Zhang, X., Wei, J., Wu, S., Zhang, H.P., Luo, M., Yang, X.L., Liao, F., Wang, D.Q.

To be published

Released	2017-11-08
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Homo sapiens
Macromolecule	Glutathione S-transferase Mu 2 (protein)
Unique Ligands	GSH, NNE

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5IHW \| pdb_00005ihw	Download File View File

The crystal structure of SdrE from staphylococcus aureus

Zhang, S., Wei, J., Wu, S., Zhang, X., Luo, M., Wang, D.

To be published

Released	2017-03-22
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Staphylococcus aureus subsp. aureus MSSA476
Macromolecule	Serine-aspartate repeat-containing protein E (protein)

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5T5H \| pdb_00005t5h	Download File View File

Structure and assembly model for the Trypanosoma cruzi 60S ribosomal subunit

Liu, Z., Gutierrez-Vargas, C., Wei, J., Grassucci, R.A., Ramesh, M., Espina, N., Sun, M., Tutuncuoglu, B., Madison-Antenucci, S., Woolford Jr., J.L., Tong, L., Frank, J.

(2016) Proc Natl Acad Sci U S A 113: 12174-12179

Released	2016-10-12
Method	ELECTRON MICROSCOPY 2.54 Å
Organisms	Trypanosoma cruzi
Macromolecule	Unique protein chains: 38 Unique nucleic acid chains: 8
Unique Ligands	MG, ZN

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5TRC \| pdb_00005trc	Download File View File

Crystal structure of phosphorylated AC3-AC5 domains of yeast acetyl-CoA carboxylase

Wei, J., Tong, L.

(2016) Cell Discov 2: 16044-16044

Released	2016-12-07
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Saccharomyces cerevisiae S288C
Macromolecule	Acetyl-CoA carboxylase (protein)
Unique Ligands	CL

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6O0H \| pdb_00006o0h	Download File View File

Cryo-EM structure of human ATP-citrate lyase in complex with inhibitor NDI-091143

Wei, J., Tong, L.

(2019) Nature 568: 566-570

Released	2019-04-17
Method	ELECTRON MICROSCOPY 3.67 Å
Organisms	Homo sapiens
Macromolecule	ATP-citrate synthase (protein)
Unique Ligands	ADP, LBG

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7VX0 \| pdb_00007vx0	Download File View File

The structure of GdmN complex with ATP

Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.

(2022) Nat Commun 13: 6617-6617

Released	2022-11-16
Method	X-RAY DIFFRACTION 2 Å
Organisms	Streptomyces hygroscopicus
Macromolecule	GdmN (protein)
Unique Ligands	ATP, CP, EDO, FE, GOL, PO4, SO4

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7VYJ \| pdb_00007vyj	Download File View File

The structure of GdmN in complex with carbamoyl adenylate intermediate

Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.

(2022) Nat Commun 13: 6617-6617

Released	2022-11-16
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Streptomyces hygroscopicus
Macromolecule	GdmN (protein)
Unique Ligands	CA0, CP, EDO, FE, GOL, PEG, SO4

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7VYO \| pdb_00007vyo	Download File View File

The structure of GdmN

Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.

(2022) Nat Commun 13: 6617-6617

Released	2022-11-16
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Streptomyces hygroscopicus
Macromolecule	GdmN (protein)
Unique Ligands	CL, CP, EDO, FE, GOL, PEG, SO4

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7VYP \| pdb_00007vyp	Download File View File

The structure of GdmN complex with the natural tetrahedral intermediate, carbamoylated derivative, and AMP

Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.

(2022) Nat Commun 13: 6617-6617

Released	2022-11-16
Method	X-RAY DIFFRACTION 2.88 Å
Organisms	Streptomyces hygroscopicus
Macromolecule	GdmN (protein)
Unique Ligands	82Z, 8CW, AMP, CP, EDO, FE, SO4

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7VZN \| pdb_00007vzn	Download File View File

The structure of GdmN in complex with carbamoyl adenylate intermediate and 20-O-methyl-19-chloroproansamitocin

Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.

(2022) Nat Commun 13: 6617-6617

Released	2022-11-16
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Streptomyces hygroscopicus
Macromolecule	GdmN (protein)
Unique Ligands	83Z, CA0, CP, EDO, FE, GOL, PEG, SO4

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7VZQ \| pdb_00007vzq	Download File View File

The structure of GdmN V24Y/G157A/R158A/G188R mutant in complex with carbamoyl adenylate intermediate

Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.

(2022) Nat Commun 13: 6617-6617

Released	2022-11-16
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Streptomyces hygroscopicus
Macromolecule	GdmN (protein)
Unique Ligands	CA0, CL, CP, EDO, FE, SO4

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7VZU \| pdb_00007vzu	Download File View File

The structure of GdmN Y82F mutant

Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.

(2022) Nat Commun 13: 6617-6617

Released	2022-11-16
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Streptomyces hygroscopicus
Macromolecule	GdmN (protein)
Unique Ligands	EDO, FE, SO4

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7VZY \| pdb_00007vzy	Download File View File

The structure of GdmN complex with AMP and 20-O-methyl-19-chloroproansamitocin

Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.

(2022) Nat Commun 13: 6617-6617

Released	2022-11-16
Method	X-RAY DIFFRACTION 2.81 Å
Organisms	Streptomyces hygroscopicus
Macromolecule	GdmN (protein)
Unique Ligands	83Z, AMP, CP, EDO, FE, GOL, PEG, SO4

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7VZZ \| pdb_00007vzz	Download File View File

The structure of GdmN in complex with the natural tetrahedral intermediate, carbamoyl adenylate, and 20-O-methyl-19-chloroproansamitocin

Wei, J., Zheng, J., Zhou, J., Kang, Q., Bai, L.

(2022) Nat Commun 13: 6617-6617

Released	2022-11-16
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Streptomyces hygroscopicus
Macromolecule	GdmN (protein)
Unique Ligands	83Z, 8CW, CA0, EDO, FE, SO4

1 to 25 of 29 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2K6S | pdb_00002k6s

3JUI | pdb_00003jui

4DZD | pdb_00004dzd

4FYP | pdb_00004fyp

4HCB | pdb_00004hcb

4HCC | pdb_00004hcc

5CS0 | pdb_00005cs0

5CS4 | pdb_00005cs4

5CSA | pdb_00005csa

5CSK | pdb_00005csk

5CSL | pdb_00005csl

5HWL | pdb_00005hwl

5IHW | pdb_00005ihw

5T5H | pdb_00005t5h

5TRC | pdb_00005trc

6O0H | pdb_00006o0h

7VX0 | pdb_00007vx0

7VYJ | pdb_00007vyj

7VYO | pdb_00007vyo

7VYP | pdb_00007vyp

7VZN | pdb_00007vzn

7VZQ | pdb_00007vzq

7VZU | pdb_00007vzu

7VZY | pdb_00007vzy

7VZZ | pdb_00007vzz