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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Protopopova, A.D."

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Search Summary

This query matches 8 Structures.

Refinements

Structure Determination Methodology

experimental (8)

Scientific Name of Source Organism

	Rattus norvegicus (6)
	Oryctolagus cuniculus (2)

Taxonomy

Eukaryota (8)

Experimental Method

ELECTRON MICROSCOPY (8)

Polymer Entity Type

Protein (8)

Refinement Resolution (Å)

	2.5 - 3.0 (3)
	3.0 - 3.5 (1)
	3.5 - 4.0 (3)
	4.0 - 4.5 (1)

Release Date

2020 - 2024 (8)

Membrane Protein Annotation

	MemProtMD (8)
	PDBTM (8)
	mpstruc (4)
	OPM (2)

Symmetry Type

Cyclic (8)

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1 to 8 of 8 Structures

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Explore in 3D

7N0M \| pdb_00007n0m	Download File View File

Inactivated state of 2-APB-bound wildtype rat TRPV2 in nanodiscs

Pumroy, R.A., Protopopova, A.D., Gallo, P.N., Moiseenkova-Bell, V.Y.

(2022) Nat Commun 13: 2334-2334

Released	2022-05-04
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Rattus norvegicus
Macromolecule	Transient receptor potential cation channel subfamily V member 2 (protein)
Unique Ligands	FZ4

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7N0N \| pdb_00007n0n	Download File View File

Activated state of 2-APB-bound wildtype rat TRPV2 in nanodiscs

Pumroy, R.A., Protopopova, A.D., Gallo, P.N., Moiseenkova-Bell, V.Y.

(2022) Nat Commun 13: 2334-2334

Released	2022-05-04
Method	ELECTRON MICROSCOPY 4.15 Å
Organisms	Rattus norvegicus
Macromolecule	Transient receptor potential cation channel subfamily V member 2 (protein)

Explore in 3D

7T37 \| pdb_00007t37	Download File View File

Activated state of 2-APB and CBD-bound wildtype rat TRPV2 in nanodiscs

Pumroy, R.A., Protopopova, A.D., Gallo, P.N., Moiseenkova-Bell, V.Y.

(2022) Nat Commun 13: 2334-2334

Released	2022-05-04
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Rattus norvegicus
Macromolecule	Transient receptor potential cation channel subfamily V member 2 (protein)
Unique Ligands	FZ4, P0T

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7T38 \| pdb_00007t38	Download File View File

Inactivated state of 2-APB and CBD-bound wildtype rat TRPV2 in nanodiscs

Pumroy, R.A., Protopopova, A.D., Gallo, P.N., Moiseenkova-Bell, V.Y.

(2022) Nat Commun 13: 2334-2334

Released	2022-05-04
Method	ELECTRON MICROSCOPY 3.8 Å
Organisms	Rattus norvegicus
Macromolecule	Transient receptor potential cation channel subfamily V member 2 (protein)

Explore in 3D

8FFL \| pdb_00008ffl	Download File View File

Wildtype rat TRPV2 in nanodiscs bound to RR

Pumroy, R.A., Protopopova, A.D., Rocereta, J.A., De Jesus-Perez, J.J., Fluck, E.C., Moiseenkova-Bell, V.Y.

(2024) EMBO Rep 25: 506-523

Released	2024-02-07
Method	ELECTRON MICROSCOPY 3.47 Å
Organisms	Rattus norvegicus
Macromolecule	Transient receptor potential cation channel subfamily V member 2 (protein)
Unique Ligands	PEX

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8FFM \| pdb_00008ffm	Download File View File

Wildtype rat TRPV2 in nanodiscs bound to RR and 2-APB

Pumroy, R.A., Protopopova, A.D., Rocereta, J.A., De Jesus-Perez, J.J., Fluck, E.C., Moiseenkova-Bell, V.Y.

(2024) EMBO Rep 25: 506-523

Released	2024-02-07
Method	ELECTRON MICROSCOPY 2.9 Å
Organisms	Rattus norvegicus
Macromolecule	Transient receptor potential cation channel subfamily V member 2 (protein)
Unique Ligands	FZ4, PEX, R2R

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8FFN \| pdb_00008ffn	Download File View File

RR-bound wildtype rabbit TRPV5 in nanodiscs

Fluck, E.C., De Jesus-Perez, J.J., Pumroy, R.A., Protopopova, A.D., Rocereta, J.A., Moiseenkova-Bell, V.Y.

(2024) EMBO Rep 25: 506-523

Released	2024-02-07
Method	ELECTRON MICROSCOPY 2.96 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Transient receptor potential cation channel subfamily V member 5 (protein)
Unique Ligands	ERG, POV, R2R

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8FFQ \| pdb_00008ffq	Download File View File

Wildtype rabbit TRPV5 into nanodiscs in the presence of PI(4,5)P2 and ruthenium red

De Jesus-Perez, J.J., Fluck, E.C., Pumroy, R.A., Protopopova, A.D., Rocereta, J.A., Moiseenkova-Bell, V.Y.

(2024) EMBO Rep 25: 506-523

Released	2024-02-07
Method	ELECTRON MICROSCOPY 2.65 Å
Organisms	Oryctolagus cuniculus
Macromolecule	Transient receptor potential cation channel subfamily V member 5 (protein)
Unique Ligands	CPL, ERG, R2R

1 to 8 of 8 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

7N0M | pdb_00007n0m

Inactivated state of 2-APB-bound wildtype rat TRPV2 in nanodiscs

7N0N | pdb_00007n0n

Activated state of 2-APB-bound wildtype rat TRPV2 in nanodiscs

7T37 | pdb_00007t37

Activated state of 2-APB and CBD-bound wildtype rat TRPV2 in nanodiscs

7T38 | pdb_00007t38

Inactivated state of 2-APB and CBD-bound wildtype rat TRPV2 in nanodiscs

8FFL | pdb_00008ffl

Wildtype rat TRPV2 in nanodiscs bound to RR

8FFM | pdb_00008ffm

Wildtype rat TRPV2 in nanodiscs bound to RR and 2-APB

8FFN | pdb_00008ffn

RR-bound wildtype rabbit TRPV5 in nanodiscs

8FFQ | pdb_00008ffq

Wildtype rabbit TRPV5 into nanodiscs in the presence of PI(4,5)P2 and ruthenium red

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Membrane Protein Annotation

Symmetry Type

7N0M | pdb_00007n0m

7N0N | pdb_00007n0n

7T37 | pdb_00007t37

7T38 | pdb_00007t38

8FFL | pdb_00008ffl

8FFM | pdb_00008ffm

8FFN | pdb_00008ffn

8FFQ | pdb_00008ffq