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234,136 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Murthy, M.R."

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Search Summary

This query matches 13 Structures.

Refinements

Structure Determination Methodology

experimental (13)

Scientific Name of Source Organism

	Sesbania mosaic virus (6)
	Plasmodium falciparum (4)
	Salmonella enterica subsp. enterica serovar Typhimurium (3)

Taxonomy

	Riboviria (6)
	Eukaryota (4)
	Bacteria (3)

Experimental Method

X-RAY DIFFRACTION (13)

Polymer Entity Type

Protein (13)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (2)
	2.0 - 2.5 (3)
	2.5 - 3.0 (2)
	3.0 - 3.5 (3)
	3.5 - 4.0 (1)
	4.0 - 4.5 (1)

Release Date

	2000 - 2004 (7)
	2005 - 2009 (6)

Enzyme Classification Name

	Transferases (2)
	Isomerases (3)
	Lyases (1)
	Ligases (1)

Symmetry Type

	Cyclic (7)
	Icosahedral (6)
	Asymmetric (1)

SCOP Classification

	Alpha and beta proteins (a/b) (7)
	All beta proteins (4)
	Artifacts (1)

AllSelected

1 to 13 of 13 Structures

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1LYX \| pdb_00001lyx	Download File View File

Plasmodium Falciparum Triosephosphate Isomerase (PfTIM)-Phosphoglycolate complex

Parthasarathy, S., Balaram, H., Balaram, P., Murthy, M.R.

(2002) Biochemistry 41: 13178-13188

Released	2003-01-28
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Plasmodium falciparum
Macromolecule	Triosephosphate Isomerase (protein)
Unique Ligands	PGA

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1LZO \| pdb_00001lzo	Download File View File

Plasmodium Falciparum Triosephosphate Isomerase-Phosphoglycolate Complex

Parthasarathy, S., Balaram, H., Balaram, P., Murthy, M.R.

(2002) Biochemistry 41: 13178-13188

Released	2003-01-28
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Plasmodium falciparum
Macromolecule	Triosephosphate Isomerase (protein)
Unique Ligands	PGA

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1O5X \| pdb_00001o5x	Download File View File

Plasmodium falciparum TIM complexed to 2-phosphoglycerate

Parthasarathy, S., Eaazhisai, K., Balaram, H., Balaram, P., Murthy, M.R.

(2003) J Biological Chem 278: 52461-52470

Released	2004-01-13
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Plasmodium falciparum
Macromolecule	Triosephosphate isomerase (protein)
Unique Ligands	2PG, 3PY, PO3

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1P9B \| pdb_00001p9b	Download File View File

Structure of fully ligated Adenylosuccinate synthetase from Plasmodium falciparum

Eaazhisai, K., Jayalakshmi, R., Gayathri, P., Anand, R.P., Sumathy, K., Balaram, H., Murthy, M.R.

(2004) J Mol Biology 335: 1251-1264

Released	2004-02-03
Method	X-RAY DIFFRACTION 2 Å
Organisms	Plasmodium falciparum
Macromolecule	Adenylosuccinate Synthetase (protein)
Unique Ligands	GDP, HDA, IMO, MG, NO3

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1VAK \| pdb_00001vak	Download File View File

T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)65

Sangita, V., Lokesh, G.L., Satheshkumer, P.S., Vijay, C.S., Saravanan, V., Savithri, H.S., Murthy, M.R.

(2004) J Mol Biology 342: 987-999

Released	2004-11-23
Method	X-RAY DIFFRACTION 3.05 Å
Organisms	Sesbania mosaic virus
Macromolecule	coat protein (protein)
Unique Ligands	CA

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1VB2 \| pdb_00001vb2	Download File View File

T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)65-D146N-D149N

Sangita, V., Lokesh, G.L., Satheshkumar, P.S., Vijay, C.S., Saravanan, V., Savithri, H.S., Murthy, M.R.

(2004) J Mol Biology 342: 987-999

Released	2004-11-23
Method	X-RAY DIFFRACTION 3.4 Å
Organisms	Sesbania mosaic virus
Macromolecule	coat protein (protein)

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1VB4 \| pdb_00001vb4	Download File View File

T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)36

Sangita, V., Lokesh, G.L., Satheshkumar, P.S., Vijay, C.S., Saravanan, V., Savithri, H.S., Murthy, M.R.

(2004) J Mol Biology 342: 987-999

Released	2004-11-23
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Sesbania mosaic virus
Macromolecule	coat protein (protein)
Unique Ligands	CA

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1X33 \| pdb_00001x33	Download File View File

T=3 recombinant capsid of SeMV CP

Sangita, V., Lokesh, G.L., Satheshkumar, P.S., Saravanan, V., Vijay, C.S., Savithri, H.S., Murthy, M.R.

(2005) Acta Crystallogr D Biol Crystallogr 61: 1402-1405

Released	2005-10-18
Method	X-RAY DIFFRACTION 3.6 Å
Organisms	Sesbania mosaic virus
Macromolecule	Coat protein (protein)
Unique Ligands	CA

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1X35 \| pdb_00001x35	Download File View File

Recombinant T=3 capsid of a site specific mutant of SeMV CP

Sangita, V., Lokesh, G.L., Satheshkumar, P.S., Saravanan, V., Vijay, C.S., Savithri, H.S., Murthy, M.R.

(2005) Acta Crystallogr D Biol Crystallogr 61: 1402-1405

Released	2005-10-18
Method	X-RAY DIFFRACTION 4.1 Å
Organisms	Sesbania mosaic virus
Macromolecule	Coat protein (protein)
Unique Ligands	CA

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1X36 \| pdb_00001x36	Download File View File

T=1 capsid of an amino-terminal deletion mutant of SeMV CP

Sangita, V., Satheshkumar, P.S., Savithri, H.S., Murthy, M.R.

(2005) Acta Crystallogr D Biol Crystallogr 61: 1406-1412

Released	2005-10-18
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Sesbania mosaic virus
Macromolecule	Coat protein (protein)
Unique Ligands	CA

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1X3M \| pdb_00001x3m	Download File View File

Crystal structure of ADP bound Propionate kinase (TdcD) from Salmonella typhimurium

Simanshu, D.K., Savithri, H.S., Murthy, M.R.

(2005) J Mol Biology 352: 876-892

Released	2005-09-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	Propionate kinase (protein)
Unique Ligands	ADP

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1X3N \| pdb_00001x3n	Download File View File

Crystal structure of AMPPNP bound Propionate kinase (TdcD) from Salmonella typhimurium

Simanshu, D.K., Savithri, H.S., Murthy, M.R.

(2005) J Mol Biology 352: 876-892

Released	2005-09-27
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	Propionate kinase (protein)
Unique Ligands	ANP, EDO

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2GN0 \| pdb_00002gn0	Download File View File

Crystal structure of dimeric biodegradative threonine deaminase (TdcB) from Salmonella typhimurium at 1.7 A resolution (Triclinic form with one complete subunit built in alternate conformation)

Simanshu, D.K., Savithri, H.S., Murthy, M.R.

(2006) J Biological Chem 281: 39630-39641

Released	2006-11-07
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	Threonine dehydratase catabolic (protein)
Unique Ligands	NA

1 to 13 of 13 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1LYX | pdb_00001lyx

Plasmodium Falciparum Triosephosphate Isomerase (PfTIM)-Phosphoglycolate complex

1LZO | pdb_00001lzo

Plasmodium Falciparum Triosephosphate Isomerase-Phosphoglycolate Complex

1O5X | pdb_00001o5x

Plasmodium falciparum TIM complexed to 2-phosphoglycerate

1P9B | pdb_00001p9b

Structure of fully ligated Adenylosuccinate synthetase from Plasmodium falciparum

1VAK | pdb_00001vak

T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)65

1VB2 | pdb_00001vb2

T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)65-D146N-D149N

1VB4 | pdb_00001vb4

T=1 capsid structure of Sesbania mosaic virus coat protein deletion mutant CP-N(delta)36

1X33 | pdb_00001x33

T=3 recombinant capsid of SeMV CP

1X35 | pdb_00001x35

Recombinant T=3 capsid of a site specific mutant of SeMV CP

1X36 | pdb_00001x36

T=1 capsid of an amino-terminal deletion mutant of SeMV CP

1X3M | pdb_00001x3m

Crystal structure of ADP bound Propionate kinase (TdcD) from Salmonella typhimurium

1X3N | pdb_00001x3n

Crystal structure of AMPPNP bound Propionate kinase (TdcD) from Salmonella typhimurium

2GN0 | pdb_00002gn0

Crystal structure of dimeric biodegradative threonine deaminase (TdcB) from Salmonella typhimurium at 1.7 A resolution (Triclinic form with one complete subunit built in alternate conformation)

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1LYX | pdb_00001lyx

1LZO | pdb_00001lzo

1O5X | pdb_00001o5x

1P9B | pdb_00001p9b

1VAK | pdb_00001vak

1VB2 | pdb_00001vb2

1VB4 | pdb_00001vb4

1X33 | pdb_00001x33

1X35 | pdb_00001x35

1X36 | pdb_00001x36

1X3M | pdb_00001x3m

1X3N | pdb_00001x3n

2GN0 | pdb_00002gn0