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234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Dong, W."

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Search Summary

This query matches 5 Structures.

Refinements

Structure Determination Methodology

experimental (5)

Scientific Name of Source Organism

	Escherichia coli BL21(DE3) (2)
	Synechocystis sp. PCC 6803 substr. Kazusa (2)
	Bacteroides thetaiotaomicron VPI-5482 (1)
	Homo sapiens (1)
	Methanothermobacter thermautotrophicus str. Delta H (1)

Taxonomy

	Bacteria (3)
	Archaea (1)
	Eukaryota (1)

Experimental Method

X-RAY DIFFRACTION (5)

Polymer Entity Type

Protein (5)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (1)
	2.5 - 3.0 (2)
	3.0 - 3.5 (1)

Release Date

	2010 - 2014 (1)
	2015 - 2019 (4)

Enzyme Classification Name

	Oxidoreductases (1)
	Lyases (1)

Symmetry Type

	Dihedral (3)
	Asymmetric (2)

SCOP Classification

	Alpha and beta proteins (a+b) (1)
	Alpha and beta proteins (a/b) (1)
	All beta proteins (1)
	Artifacts (1)
	Small proteins (1)

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1 to 5 of 5 Structures

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4FNV \| pdb_00004fnv	Download File View File

Crystal Structure of Heparinase III

Dong, W., Ye, S.

(2012) Protein Cell 3: 950-961

Released	2012-11-28
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Bacteroides thetaiotaomicron VPI-5482
Macromolecule	Heparinase III protein, heparitin sulfate lyase (protein)

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4RO0 \| pdb_00004ro0	Download File View File

Crystal structure of MthK gating ring in a ligand-free form

Dong, W., Guo, R., Chai, H., Chen, Z., Cui, H., Ren, Z., Li, Y., Ye, S.

To be published

Released	2015-10-28
Method	X-RAY DIFFRACTION 3.18 Å
Organisms	Methanothermobacter thermautotrophicus str. Delta H
Macromolecule	Calcium-gated potassium channel MthK (protein)

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5B6L \| pdb_00005b6l	Download File View File

Structure of Deg protease HhoA from Synechocystis sp. PCC 6803

Dong, W., Wang, J., Liu, L.

(2016) FEBS Lett 590: 3435-3442

Released	2016-09-21
Method	X-RAY DIFFRACTION 2.801 Å
Organisms	Escherichia coli BL21(DE3) Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Putative serine protease HhoA (protein) UNK-UNK-UNK-UNK-TRP (protein)
Unique Ligands	NA, ZN

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5FWJ \| pdb_00005fwj	Download File View File

Crystal structure of human JARID1C in complex with KDM5-C49

Srikannathasan, V., Szykowska, A., Strain-Damerell, C., Kopec, J., Nowak, R., Gileadi, C., Johansson, C., Kupinska, K., Burgess-Brown, N.A., Shrestha, L., Dong, W., von Delft, F., Arrowsmith, C.H., Bountra, C., Edwards, A., Huber, K., Oppermann, U.

(2016) Nat Chem Biol 12: 539

Released	2016-04-13
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	HISTONE DEMETHYLASE JARID1C (protein)
Unique Ligands	MG, MMK, MN, ZN

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5GND \| pdb_00005gnd	Download File View File

Structure of Deg protease HhoA from Synechocystis sp. PCC 6803

Dong, W., Wang, J., Liu, L.

(2016) FEBS Lett 590: 3435-3442

Released	2016-09-21
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli BL21(DE3) Synechocystis sp. PCC 6803 substr. Kazusa
Macromolecule	Putative serine protease HhoA (protein) UNK-UNK-UNK-UNK-TRP (protein)
Unique Ligands	NA, ZN

1 to 5 of 5 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

4FNV | pdb_00004fnv

Crystal Structure of Heparinase III

4RO0 | pdb_00004ro0

Crystal structure of MthK gating ring in a ligand-free form

5B6L | pdb_00005b6l

Structure of Deg protease HhoA from Synechocystis sp. PCC 6803

5FWJ | pdb_00005fwj

Crystal structure of human JARID1C in complex with KDM5-C49

5GND | pdb_00005gnd

Structure of Deg protease HhoA from Synechocystis sp. PCC 6803

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

4FNV | pdb_00004fnv

Crystal Structure of Heparinase III

4RO0 | pdb_00004ro0

Crystal structure of MthK gating ring in a ligand-free form

5B6L | pdb_00005b6l

Structure of Deg protease HhoA from Synechocystis sp. PCC 6803

5FWJ | pdb_00005fwj

Crystal structure of human JARID1C in complex with KDM5-C49

5GND | pdb_00005gnd

Structure of Deg protease HhoA from Synechocystis sp. PCC 6803