RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

234,440 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Cui, Q."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 27 Structures.

Refinements

Structure Determination Methodology

experimental (27)

Scientific Name of Source Organism

	Escherichia coli K-12 (8)
	Rhodococcus opacus (7)
	Homo sapiens (6)
	Klebsiella sp. BK-58 (3)
	Acetivibrio thermocellus DSM 1313 (1)
	Nannochloris (1)
	Saccharolobus shibatae (1)
	Salasvirus phi29 (1)

Taxonomy

	Bacteria (19)
	Eukaryota (7)
	Archaea (1)
	Duplodnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (26)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (27)
	DNA (8)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (11)
	2.0 - 2.5 (11)
	2.5 - 3.0 (1)
	3.0 - 3.5 (1)

Release Date

	2005 - 2009 (1)
	2010 - 2014 (8)
	2015 - 2019 (6)
	2020 - 2024 (12)

Enzyme Classification Name

	Oxidoreductases (8)
	Hydrolases (2)

Symmetry Type

	Cyclic (16)
	Asymmetric (12)

SCOP Classification

	All beta proteins (9)
	Alpha and beta proteins (a+b) (1)
	Artifacts (1)
	All alpha proteins (1)

AllSelected

1 to 25 of 27 Structures

Page 1 of 2

Sort by

Explore in 3D

1Y9X \| pdb_00001y9x	Download File View File

Solution structure of Archaeon DNA-binding protein ssh10b

Cui, Q., Tong, Y., Wang, J.

(2008) Biochemistry 47: 11212-11221

Released	2005-06-21
Method	SOLUTION NMR
Organisms	Saccharolobus shibatae
Macromolecule	DNA/RNA-binding protein Alba 1 (protein)

Explore in 3D

3O1M \| pdb_00003o1m	Download File View File

Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase

Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.

(2010) Nature 468: 330-333

Released	2010-11-17
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Escherichia coli K-12
Macromolecule	Alpha-ketoglutarate-dependent dioxygenase AlkB (protein) DNA (5'-D(APAPCPGPGPTPAPTPTPAPCPCPT)-3') (nucleic acid) DNA (5'-D(TAPGPGPTPAPAP(ME6)PAPCPCPGPT)-3') (nucleic acid)
Unique Ligands	AKG, MN

Explore in 3D

3O1O \| pdb_00003o1o	Download File View File

Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase

Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.

(2010) Nature 468: 330-333

Released	2010-11-17
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Escherichia coli K-12
Macromolecule	Alpha-ketoglutarate-dependent dioxygenase AlkB (protein) DNA (5'-D(APAPCPGPGPTPAPTPTPAPCPCPT)-3') (nucleic acid) DNA (5'-D(TAPGPGPTPAPAP(MFT)PAPCPCPGPT)-3') (nucleic acid)
Unique Ligands	AKG, MN

Explore in 3D

3O1P \| pdb_00003o1p	Download File View File

Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase

Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.

(2010) Nature 468: 330-333

Released	2010-11-17
Method	X-RAY DIFFRACTION 1.51 Å
Organisms	Escherichia coli K-12
Macromolecule	Alpha-ketoglutarate-dependent dioxygenase AlkB (protein) DNA (5'-D(APAPCPGPGPTPAPTPTPAPCPCPT)-3') (nucleic acid) DNA (5'-D(TAPGPGPTPAPAP(EDA)PAPCPCPGPT)-3') (nucleic acid)
Unique Ligands	AKG, GOL, MN

Explore in 3D

3O1R \| pdb_00003o1r	Download File View File

Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase

Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.

(2010) Nature 468: 330-333

Released	2010-11-17
Method	X-RAY DIFFRACTION 1.77 Å
Organisms	Escherichia coli K-12
Macromolecule	Alpha-ketoglutarate-dependent dioxygenase AlkB (protein) DNA (5'-D(APAPCPGPGPTPAPTPTPAPCPCPT)-3') (nucleic acid) DNA (5'-D(APGPGPTPAPAP(MDK)PAPCPCPGP*T)-3') (nucleic acid)
Unique Ligands	AKG, GOL, MN

Explore in 3D

3O1S \| pdb_00003o1s	Download File View File

Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase

Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.

(2010) Nature 468: 330-333

Released	2010-11-17
Method	X-RAY DIFFRACTION 1.58 Å
Organisms	Escherichia coli K-12
Macromolecule	Alpha-ketoglutarate-dependent dioxygenase AlkB (protein) DNA (5'-D(APAPCPGPGPTPAPTPTPAPCPCPT)-3') (nucleic acid) DNA (5'-D(APGPGPTPAPAP(MDQ)PAPCPCPGP*T)-3') (nucleic acid)
Unique Ligands	FE, SIN

Explore in 3D

3O1T \| pdb_00003o1t	Download File View File

Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase

Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.

(2010) Nature 468: 330-333

Released	2010-11-17
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Escherichia coli K-12
Macromolecule	Alpha-ketoglutarate-dependent dioxygenase AlkB (protein) DNA (5'-D(APAPCPGPGPTPAPTPTPAPCPCPT)-3') (nucleic acid) DNA (5'-D(APGPGPTPAPAP(MDU)PAPCPCPGP*T)-3') (nucleic acid)
Unique Ligands	FE, SIN

Explore in 3D

3O1U \| pdb_00003o1u	Download File View File

Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase

Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.

(2010) Nature 468: 330-333

Released	2010-11-17
Method	X-RAY DIFFRACTION 1.54 Å
Organisms	Escherichia coli K-12
Macromolecule	Alpha-ketoglutarate-dependent dioxygenase AlkB (protein) DNA (5'-D(APAPCPGPGPTPAPTPTPAPCPCPT)-3') (nucleic acid) DNA (5'-D(APGPGPTPAPAP(MDV)PAPCPCPGP*T)-3') (nucleic acid)
Unique Ligands	FE, SIN

Explore in 3D

3O1V \| pdb_00003o1v	Download File View File

Iron-Catalyzed Oxidation Intermediates Captured in A DNA Repair Dioxygenase

Yi, C., Jia, G., Hou, G., Dai, Q., Zhang, W., Zheng, G., Jian, X., Yang, C.-G., Cui, Q., He, C.

(2010) Nature 468: 330-333

Released	2010-11-17
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli K-12
Macromolecule	Alpha-ketoglutarate-dependent dioxygenase AlkB (protein) DNA (5'-D(APAPCPGPGPTPAPTPTPAPCPCPT)-3') (nucleic acid) DNA (5'-D(APGPGPTPAPAP(MDJ)PAPCPCPGP*T)-3') (nucleic acid)
Unique Ligands	FE, SIN

Explore in 3D

5CHX \| pdb_00005chx	Download File View File

Crystal Structure of amino acids 1590-1657 of MYH7

Korkmaz, N.E., Taylor, K.C., Andreas, M.P., Ajay, G., Heinz, N.T., Cui, Q., Rayment, I.

(2016) Proteins 84: 172-189

Released	2015-12-02
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Xrcc4-MYH7-1590-1657 (protein)

Explore in 3D

5CJ0 \| pdb_00005cj0	Download File View File

Crystal Structure of Amino Acids 1631-1692 of MYH7

Korkmaz, N.E., Taylor, K.C., Andreas, M.P., Ajay, G., Heinze, N.T., Cui, Q., Rayment, I.

(2016) Proteins 84: 172-189

Released	2015-12-02
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Xrcc4-MYH7-(1631-1692) chimera protein (protein)

Explore in 3D

5CJ1 \| pdb_00005cj1	Download File View File

Crystal structure of the coiled coil of MYH7 residues 1526 to 1571 fused to Gp7

Taylor, K.C., Korkmaz, E.N., Andreas, M.P., Ajay, G., Heinz, N.T., Cui, Q., Rayment, I.

(2016) Proteins 84: 172-189

Released	2015-12-02
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens Salasvirus phi29
Macromolecule	Gp7-MYH7-(1526-1571) chimera protein (protein)

Explore in 3D

5CJ4 \| pdb_00005cj4	Download File View File

Crystal Structure of Amino Acids 1562-1622 of MYH7

Korkmaz, N.E., Taylor, K.C., Andreas, M.P., Ajay, G., Heinze, N.T., Cui, Q., Rayment, I.

(2016) Proteins 84: 172-189

Released	2015-12-02
Method	X-RAY DIFFRACTION 3.102 Å
Organisms	Homo sapiens
Macromolecule	Xrcc4-MYH7-(1562-1622) chimera protein (protein)

Explore in 3D

5YJ6 \| pdb_00005yj6	Download File View File

The exoglucanase CelS from Clostridium thermocellum

Liu, Y.J., Liu, S.Y., Dong, S., Li, R.M., Feng, Y.G., Cui, Q.

(2018) Biotechnol Biofuels 11: 6-6

Released	2018-01-31
Method	X-RAY DIFFRACTION 1.43 Å
Organisms	Acetivibrio thermocellus DSM 1313
Macromolecule	Dockerin type I repeat-containing protein (protein)
Unique Ligands	33O

Explore in 3D

5YJ7 \| pdb_00005yj7	Download File View File

Structural insight into the beta-GH1 glucosidase BGLN1 from oleaginous microalgae Nannochloropsis

Dong, S., Liu, Y.J., Zhou, H.X., Xiao, Y., Xu, J., Cui, Q., Wang, X.Q., Feng, Y.G.

(2021) Int J Biol Macromol 170: 196-206

Released	2018-10-10
Method	X-RAY DIFFRACTION 1.61 Å
Organisms	Nannochloris
Macromolecule	Glycoside hydrolase (protein)
Unique Ligands	CA, GOL

Explore in 3D

6PF2 \| pdb_00006pf2	Download File View File

Crystal Structure of Amino Acids 1220-1276 of Human Beta Cardiac Myosin Fused to Gp7 and Eb1

Andreas, M.P., Korkmaz, E.N., Kirsch, C.J., Hargreaves, M., Kieffer, D.J., Ajay, G., Cui, Q., Rayment, I.

To be published

Released	2020-06-24
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Homo sapiens
Macromolecule	Myosin, heavy polypeptide 7, cardiac muscle, beta variant (protein)
Unique Ligands	EDO