RCSB PDB: Search

2XAF \| pdb_00002xaf	Download File View File

Crystal structure of LSD1-CoREST in complex with para-bromo-(+)-cis-2- phenylcyclopropyl-1-amine

Binda, C., Valente, S., Romanenghi, M., Pilotto, S., Cirilli, R., Karytinos, A., Ciossani, G., Botrugno, O.A., Forneris, F., Tardugno, M., Edmondson, D.E., Minucci, S., Mattevi, A., Mai, A.

(2010) J Am Chem Soc 132: 6827

Released	2010-05-05
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD, TCF

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2XAG \| pdb_00002xag	Download File View File

Crystal structure of LSD1-CoREST in complex with para-bromo-(-)-trans- 2-phenylcyclopropyl-1-amine

Binda, C., Valente, S., Romanenghi, M., Pilotto, S., Cirilli, R., Karytinos, A., Ciossani, G., Botrugno, O.A., Forneris, F., Tardugno, M., Edmondson, D.E., Minucci, S., Mattevi, A., Mai, A.

(2010) J Am Chem Soc 132: 6827

Released	2010-05-05
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD, TCF

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2XAH \| pdb_00002xah	Download File View File

Crystal structure of LSD1-CoREST in complex with (+)-trans-2- phenylcyclopropyl-1-amine

Binda, C., Valente, S., Romanenghi, M., Pilotto, S., Cirilli, R., Karytinos, A., Ciossani, G., Botrugno, O.A., Forneris, F., Tardugno, M., Edmondson, D.E., Minucci, S., Mattevi, A., Mai, A.

(2010) J Am Chem Soc 132: 6827

Released	2010-05-05
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	3PL, FAD

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2XAJ \| pdb_00002xaj	Download File View File

Crystal structure of LSD1-CoREST in complex with (-)-trans-2- phenylcyclopropyl-1-amine

Binda, C., Valente, S., Romanenghi, M., Pilotto, S., Cirilli, R., Karytinos, A., Ciossani, G., Botrugno, O.A., Forneris, F., Tardugno, M., Edmondson, D.E., Minucci, S., Mattevi, A., Mai, A.

(2010) J Am Chem Soc 132: 6827

Released	2010-05-05
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD, TCA

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2XAQ \| pdb_00002xaq	Download File View File

Crystal structure of LSD1-CoREST in complex with a tranylcypromine derivative (MC2584, 13b)

Binda, C., Valente, S., Romanenghi, M., Pilotto, S., Cirilli, R., Karytinos, A., Ciossani, G., Botrugno, O.A., Forneris, F., Tardugno, M., Edmondson, D.E., Minucci, S., Mattevi, A., Mai, A.

(2010) J Am Chem Soc 132: 6827

Released	2010-05-05
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD, M84

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2XAS \| pdb_00002xas	Download File View File

Crystal structure of LSD1-CoREST in complex with a tranylcypromine derivative (MC2580, 14e)

Binda, C., Valente, S., Romanenghi, M., Pilotto, S., Cirilli, R., Karytinos, A., Ciossani, G., Botrugno, O.A., Forneris, F., Tardugno, M., Edmondson, D.E., Minucci, S., Mattevi, A., Mai, A.

(2010) J Am Chem Soc 132: 6827

Released	2010-05-05
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD, M80

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3ZMS \| pdb_00003zms	Download File View File

LSD1-CoREST in complex with INSM1 peptide

Tortorici, M., Borrello, M.T., Tardugno, M., Chiarelli, L.R., Pilotto, S., Ciossani, G., Vellore, N.A., Cowan, J., O'Connell, M., Mai, A., Baron, R., Ganesan, A., Mattevi, A.

(2013) ACS Chem Biol 8: 1677

Released	2013-06-12
Method	X-RAY DIFFRACTION 2.96 Å
Organisms	Homo sapiens
Macromolecule	INSULINOMA-ASSOCIATED PROTEIN 1 (protein) LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD

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3ZMT \| pdb_00003zmt	Download File View File

LSD1-CoREST in complex with PRSFLV peptide

Tortorici, M., Borrello, M.T., Tardugno, M., Chiarelli, L.R., Pilotto, S., Ciossani, G., Vellore, N.A., Cowan, J., O'Connell, M., Mai, A., Baron, R., Ganesan, A., Mattevi, A.

(2013) ACS Chem Biol 8: 1677

Released	2013-06-12
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) PEPTIDE (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD

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3ZMU \| pdb_00003zmu	Download File View File

LSD1-CoREST in complex with PKSFLV peptide

Tortorici, M., Borrello, M.T., Tardugno, M., Chiarelli, L.R., Pilotto, S., Ciossani, G., Vellore, N.A., Cowan, J., O'Connell, M., Mai, A., Baron, R., Ganesan, A., Mattevi, A.

(2013) ACS Chem Biol 8: 1677-1682

Released	2013-06-12
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) PKSFLV PEPTIDE (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD

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3ZMV \| pdb_00003zmv	Download File View File

LSD1-CoREST in complex with PLSFLV peptide

Tortorici, M., Borrello, M.T., Tardugno, M., Chiarelli, L.R., Pilotto, S., Ciossani, G., Vellore, N.A., Cowan, J., O'Connell, M., Mai, A., Baron, R., Ganesan, A., Mattevi, A.

(2013) ACS Chem Biol 8: 1677-1682

Released	2013-06-12
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) PKSFLV PEPTIDE (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD

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3ZMZ \| pdb_00003zmz	Download File View File

LSD1-CoREST in complex with PRSFAV peptide

Tortorici, M., Borrello, M.T., Tardugno, M., Chiarelli, L.R., Pilotto, S., Ciossani, G., Vellore, N.A., Cowan, J., O'Connell, M., Mai, A., Baron, R., Ganesan, A., Mattevi, A.

(2013) ACS Chem Biol 8: 1677

Released	2013-06-12
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) PEPTIDE (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD

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3ZN0 \| pdb_00003zn0	Download File View File

LSD1-CoREST in complex with PRSFAA peptide

Tortorici, M., Borrello, M.T., Tardugno, M., Chiarelli, L.R., Pilotto, S., Ciossani, G., Vellore, N.A., Cowan, J., O'Connell, M., Mai, A., Baron, R., Ganesan, A., Mattevi, A.

(2013) ACS Chem Biol 8: 1677

Released	2013-06-12
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) PEPTIDE (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD

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3ZN1 \| pdb_00003zn1	Download File View File

LSD1-CoREST in complex with PRLYLV peptide

Tortorici, M., Borrello, M.T., Tardugno, M., Chiarelli, L.R., Pilotto, S., Ciossani, G., Vellore, N.A., Cowan, J., O'Connell, M., Mai, A., Baron, R., Ganesan, A., Mattevi, A.

(2013) ACS Chem Biol 8: 1677-1682

Released	2013-06-12
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) PEPTIDE (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD

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4CZZ \| pdb_00004czz	Download File View File

Histone demethylase LSD1(KDM1A)-CoREST3 Complex

Barrios, A.P., Gomez, A.V., Saez, J.E., Ciossani, G., Toffolo, E., Battaglioli, E., Mattevi, A., Andres, M.E.

(2014) Mol Cell Biol 34: 2760

Released	2014-06-11
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 3 (protein)
Unique Ligands	FAD

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4UV8 \| pdb_00004uv8	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Benzyl-Tranylcypromine

Vianello, P., Botrugno, O., Cappa, A., Ciossani, G., Dessanti, P., Mai, A., Mattevi, A., Meroni, G., Minucci, S., Thaler, F., Tortorici, M., Trifiro, P., Valente, S., Villa, M., Varasi, M., Mercurio, C.

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D69

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4UV9 \| pdb_00004uv9	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Ethyl-Tranylcypromine

Vianello, P., Botrugno, O., Cappa, A., Ciossani, G., Dessanti, P., Mai, A., Mattevi, A., Meroni, G., Minucci, S., Thaler, F., Tortorici, M., Trifiro, P., Valente, S., Villa, M., Varasi, M., Mercurio, C.

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 3 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D70

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4UVA \| pdb_00004uva	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Methyl-Tranylcypromine (1R,2S)

Vianello, P., Botrugno, O., Cappa, A., Ciossani, G., Dessanti, P., Mai, A., Mattevi, A., Meroni, G., Minucci, S., Thaler, F., Tortorici, M., Trifiro, P., Valente, S., Villa, M., Varasi, M., Mercurio, C.

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D73

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4UVB \| pdb_00004uvb	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Methyl-Tranylcypromine (1S,2R)

Vianello, P., Botrugno, O., Cappa, A., Ciossani, G., Dessanti, P., Mai, A., Mattevi, A., Meroni, G., Minucci, S., Thaler, F., Tortorici, M., Trifiro, P., Valente, S., Villa, M., Varasi, M., Mercurio, C.

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D51

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4UVC \| pdb_00004uvc	Download File View File

LSD1(KDM1A)-CoREST in complex with 1-Phenyl-Tranylcypromine

Vianello, P., Botrugno, O., Cappa, A., Ciossani, G., Dessanti, P., Mai, A., Mattevi, A., Meroni, G., Minucci, S., Thaler, F., Tortorici, M., Trifiro, P., Valente, S., Villa, M., Varasi, M., Mercurio, C.

(2014) Eur J Med Chem 86C: 352

Released	2014-09-10
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	D52

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4UXN \| pdb_00004uxn	Download File View File

LSD1(KDM1A)-CoREST in complex with Z-Pro derivative of MC2580

Rodriguez, V., Valente, S., Stazi, G., Lucidi, A., Mercurio, C., Vianello, P., Ciossani, G., Mattevi, A., Botrugno, O.A., Dessanti, P., Minucci, S., Varasi, M., Mai, A.

(2015) ChemMedChem 6: 665-670

Released	2015-02-25
Method	X-RAY DIFFRACTION 2.85 Å
Organisms	Homo sapiens
Macromolecule	LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A (protein) REST COREPRESSOR 1 (protein)
Unique Ligands	FAD, M8A

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5L3E \| pdb_00005l3e	Download File View File

LSD1-CoREST1 in complex with quinazoline-derivative reversible inhibitor

Speranzini, V., Rotili, D., Ciossani, G., Pilotto, S., Forgione, M., Lucidi, A., Forneris, F., Velankar, S., Mai, A., Mattevi, A.

(2016) Sci Adv 2: e1601017-e1601017

Released	2016-09-21
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	Lysine-specific histone demethylase 1A (protein) REST corepressor 1 (protein)
Unique Ligands	E11, FAD, NA

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5L3F \| pdb_00005l3f	Download File View File

LSD1-CoREST1 in complex with polymyxin B

Speranzini, V., Rotili, D., Ciossani, G., Pilotto, S., Forgione, M., Lucidi, A., Forneris, F., Velankar, S., Mai, A., Mattevi, A.

(2016) Sci Adv 2: e1601017-e1601017

Released	2016-09-21
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Homo sapiens Paenibacillus polymyxa
Macromolecule	Lysine-specific histone demethylase 1A (protein) Polmyxin B (protein) REST corepressor 1 (protein)
Unique Ligands	FAD

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5L3G \| pdb_00005l3g	Download File View File

LSD1-CoREST1 in complex with polymyxin E (colistin)

Speranzini, V., Rotili, D., Ciossani, G., Pilotto, S., Forgione, M., Lucidi, A., Forneris, F., Velankar, S., Mai, A., Mattevi, A.

(2016) Sci Adv 2: e1601017-e1601017

Released	2016-09-21
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens Paenibacillus polymyxa
Macromolecule	Lysine-specific histone demethylase 1A (protein) REST corepressor 1 (protein) polymyxin E (protein)
Unique Ligands	FAD, NA

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5LBQ \| pdb_00005lbq	Download File View File

LSD1-CoREST1 in complex with quinazoline-derivative reversible inhibitor

Speranzini, V., Rotili, D., Ciossani, G., Pilotto, S., Forgione, M., Lucidi, A., Forneris, F., Velankar, S., Mai, A., Mattevi, A.

(2016) Sci Adv 2: e1601017-e1601017

Released	2016-09-21
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Homo sapiens
Macromolecule	Lysine-specific histone demethylase 1A (protein) REST corepressor 1 (protein)
Unique Ligands	767, FAD

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5LGN \| pdb_00005lgn	Download File View File

Thieno[3,2-b]pyrrole-5-carboxamides as Novel Reversible Inhibitors of Histone Lysine Demethylase KDM1A/LSD1: Compound 19

Mattevi, A., Ciossani, G.

(2017) J Med Chem 60: 1673-1692

Released	2017-02-22
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	Lysine-specific histone demethylase 1A (protein) REST corepressor 1 (protein)
Unique Ligands	6W0, FAD

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2XAF | pdb_00002xaf

2XAG | pdb_00002xag

2XAH | pdb_00002xah

2XAJ | pdb_00002xaj

2XAQ | pdb_00002xaq

2XAS | pdb_00002xas

3ZMS | pdb_00003zms

3ZMT | pdb_00003zmt

3ZMU | pdb_00003zmu

3ZMV | pdb_00003zmv

3ZMZ | pdb_00003zmz

3ZN0 | pdb_00003zn0

3ZN1 | pdb_00003zn1

4CZZ | pdb_00004czz

4UV8 | pdb_00004uv8

4UV9 | pdb_00004uv9

4UVA | pdb_00004uva

4UVB | pdb_00004uvb

4UVC | pdb_00004uvc

4UXN | pdb_00004uxn

5L3E | pdb_00005l3e

5L3F | pdb_00005l3f

5L3G | pdb_00005l3g

5LBQ | pdb_00005lbq

5LGN | pdb_00005lgn