8K55

Crystal structure of sulfur transferase from Frondihabitans sp. PAMC28461 crystallized in the P1 space group


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.269 
  • R-Value Work: 0.215 

wwPDB Validation   3D Report Full Report


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Literature

Structural and functional characterization of sulfurtransferase from Frondihabitans sp. PAMC28461.

Do, H.Nguyen, D.L.Ahn, Y.Y.Nam, Y.Kang, Y.Oh, H.Hwang, J.Han, S.J.Kim, K.Lee, J.H.

(2024) PLoS One 19: e0298999-e0298999

  • DOI: https://doi.org/10.1371/journal.pone.0298999
  • Primary Citation of Related Structures:  
    8K55, 8K57

  • PubMed Abstract: 

    Sulfurtransferases transfer of sulfur atoms from thiols to acceptors like cyanide. They are categorized as thiosulfate sulfurtransferases (TSTs) and 3-mercaptopyruvate sulfurtransferases (MSTs). TSTs transfer sulfur from thiosulfate to cyanide, producing thiocyanate. MSTs transfer sulfur from 3-mercaptopyruvate to cyanide, yielding pyruvate and thiocyanate. The present study aimed to isolate and characterize the sulfurtransferase FrST from Frondihabitans sp. PAMC28461 using biochemical and structural analyses. FrST exists as a dimer and can be classified as a TST rather than an MST according to sequence-based clustering and enzyme activity. Furthermore, the discovery of activity over a wide temperature range and the broad substrate specificity exhibited by FrST suggest promising prospects for its utilization in industrial applications, such as the detoxification of cyanide.


  • Organizational Affiliation

    Research Unit of Cryogenic Novel Material, Korea Polar Research Institute, Incheon, Korea.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
sulfur transferase
A, B
306Frondihabitans sp.Mutation(s): 0 
UniProt
Find proteins for A0A2R2W8Z3 (Frondihabitans sp. 762G35)
Explore A0A2R2W8Z3 
Go to UniProtKB:  A0A2R2W8Z3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupA0A2R2W8Z3
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.00 Å
  • R-Value Free: 0.269 
  • R-Value Work: 0.215 
  • Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 35.25α = 89.063
b = 61.6β = 76.302
c = 74.08γ = 79.637
Software Package:
Software NamePurpose
REFMACrefinement
XDSdata reduction
Aimlessdata scaling
MOLREPphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Other governmentKorea, Republic OfPM23030

Revision History  (Full details and data files)

  • Version 1.0: 2024-04-24
    Type: Initial release