Crystal structure of GppNHp bound GTPase domain of Rab5a from Leishmania donovani
Pandey, D., Zohib, M., Pal, R.K., Biswal, B.K., Arora, A.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Rab5a | 175 | Leishmania donovani | Mutation(s): 4  Gene Names: Rab5a | ||
UniProt | |||||
Find proteins for A0A109NYM0 (Leishmania donovani) Explore A0A109NYM0  Go to UniProtKB:  A0A109NYM0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0A109NYM0 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GNP (Subject of Investigation/LOI) Query on GNP | C [auth A] | PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER C10 H17 N6 O13 P3 UQABYHGXWYXDTK-UUOKFMHZSA-N | |||
EDO Query on EDO | B [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
MG (Subject of Investigation/LOI) Query on MG | D [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 110.552 | α = 90 |
b = 42.266 | β = 103.387 |
c = 37.777 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
HKL-2000 | data scaling |
HKL-2000 | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Council of Scientific & Industrial Research (CSIR) | India | CSIR NCP MLP2031 |
Global Challenges Research Fund | United Kingdom | MR/P027989/1 |