Crystal structure of Aquifex aeolicus TsaD-TsaB in complex with ADP
Lu, S.Z., Zhang, W.H.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
tRNA N6-adenosine threonylcarbamoyltransferase | 335 | Aquifex aeolicus | Mutation(s): 0  Gene Names: tsaD, gcp, aq_801 EC: 2.3.1.234 | ![]() | |
UniProt | |||||
Find proteins for O66986 (Aquifex aeolicus (strain VF5)) Explore O66986  Go to UniProtKB:  O66986 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O66986 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Gcp-like domain-containing protein | 200 | Aquifex aeolicus | Mutation(s): 0  Gene Names: aq_082 | ![]() | |
UniProt | |||||
Find proteins for O66494 (Aquifex aeolicus (strain VF5)) Explore O66494  Go to UniProtKB:  O66494 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | O66494 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ADP (Subject of Investigation/LOI) Query on ADP | D [auth A] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N | |||
PEG Query on PEG | E [auth A], F [auth A], G [auth B] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
FE (Subject of Investigation/LOI) Query on FE | C [auth A] | FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
CSO Query on CSO | A | L-PEPTIDE LINKING | C3 H7 N O3 S | CYS |
Length ( Å ) | Angle ( ˚ ) |
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a = 98.017 | α = 90 |
b = 98.017 | β = 90 |
c = 131.432 | γ = 120 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
CrysalisPro | data reduction |
Aimless | data scaling |
Coot | model building |
MOLREP | phasing |
Funding Organization | Location | Grant Number |
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National Natural Science Foundation of China (NSFC) | China | 32000847 |