Cryo-EM structure of human TMEM87A, PE-bound
Han, A., Kim, H.M.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Transmembrane protein 87A | 555 | Homo sapiens | Mutation(s): 0  Gene Names: TMEM87A, PSEC0094 Membrane Entity: Yes  | ||
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q8NBN3 (Homo sapiens) Explore Q8NBN3  Go to UniProtKB:  Q8NBN3 | |||||
PHAROS:  Q8NBN3 GTEx:  ENSG00000103978  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8NBN3 | ||||
Glycosylation | |||||
Glycosylation Sites: 3 | Go to GlyGen: Q8NBN3-1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
L9Q (Subject of Investigation/LOI) Query on L9Q | E [auth A] | (1S)-2-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-1-[(octadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate C41 H80 N O8 P JQKOHRZNEOQNJE-VYCVAHKRSA-N | |||
CLR (Subject of Investigation/LOI) Query on CLR | F [auth A], G [auth A] | CHOLESTEROL C27 H46 O HVYWMOMLDIMFJA-DPAQBDIFSA-N |
Task | Software Package | Version |
---|---|---|
RECONSTRUCTION | cryoSPARC | 3.3.2 |
MODEL REFINEMENT | PHENIX | 1.19.2 |
Funding Organization | Location | Grant Number |
---|---|---|
Other government | Korea, Republic Of | IBS-R030-C1 |