11 cysteine-to-serine mutations improve stability of cellodextrin phosphorylase from Clostridium thermocellum
Kuga, T., Sunagawa, N., Igarashi, K.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cellodextrin phosphorylase | 993 | Acetivibrio thermocellus | Mutation(s): 12  Gene Names: cdp-ym4 | ||
UniProt | |||||
Find proteins for Q93HT8 (Acetivibrio thermocellus) Explore Q93HT8  Go to UniProtKB:  Q93HT8 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q93HT8 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 6 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
BGC (Subject of Investigation/LOI) Query on BGC | D [auth A], V [auth B] | beta-D-glucopyranose C6 H12 O6 WQZGKKKJIJFFOK-VFUOTHLCSA-N | |||
PEG Query on PEG | GA [auth B], M [auth A], O [auth A] | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | |||
PO4 (Subject of Investigation/LOI) Query on PO4 | C [auth A], U [auth B] | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K | |||
GOL Query on GOL | CA [auth B] DA [auth B] E [auth A] EA [auth B] FA [auth B] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | |||
ACT Query on ACT | AA [auth B] BA [auth B] F [auth A] G [auth A] H [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | |||
CL Query on CL | JA [auth B], KA [auth B], P [auth A], Q [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 82.277 | α = 98.41 |
b = 88.52 | β = 110.69 |
c = 88.54 | γ = 110.65 |
Software Name | Purpose |
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PHENIX | refinement |
XDS | data reduction |
Aimless | data scaling |
PHENIX | phasing |
Funding Organization | Location | Grant Number |
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Japan Society for the Promotion of Science (JSPS) | Japan | 22J12566 |
Ministry of Education, Culture, Sports, Science and Technology (Japan) | Japan | 18H05494 |