8EH2

Short-chain dehydrogenase/reductase (SDR) from Acinetobacter baumannii

PDB DOI: https://doi.org/10.2210/pdb8EH2/pdb

Classification: OXIDOREDUCTASE
Organism(s): Acinetobacter baumannii
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2022-09-13 Released: 2022-11-16
Deposition Author(s): Shaw, K.
Funding Organization(s): Not funded

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.40 Å
R-Value Free: 0.226
R-Value Work: 0.190
R-Value Observed: 0.192

Starting Model: experimental
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wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Short-chain dehydrogenase/reductase (SDR) from Acinetobacter baumannii

Forwood, J.K.

To be published.

Macromolecule Content

Total Structure Weight: 55.65 kDa
Atom Count: 4,046
Modelled Residue Count: 520
Deposited Residue Count: 522
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
SDR family oxidoreductase	A, B	261	Acinetobacter baumannii	Mutation(s): 0 Gene Names: F4T85_19375, FJU42_12090, HBK86_07635
UniProt
Find proteins for A0A0M3FP68 (Acinetobacter baumannii) Explore A0A0M3FP68 Go to UniProtKB: A0A0M3FP68
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A0M3FP68
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.40 Å
R-Value Free: 0.226
R-Value Work: 0.190
R-Value Observed: 0.192
Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 67.431	α = 90
b = 109.46	β = 90
c = 136.92	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
XDS	data reduction
Aimless	data scaling
PHASER	phasing

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2022-11-16

Deposition Author(s):

Funding Organization	Location	Grant Number
Not funded		--

Revision History (Full details and data files)

Version 1.0: 2022-11-16
Type: Initial release
Version 1.1: 2023-10-18
Changes: Data collection, Refinement description

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.