Structure of IgE bound to the ectodomain of FceRIa
Andersen, G.R., Jensen, R.K.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Immunoglobulin heavy constant epsilon | A [auth H], D [auth X] | 426 | Homo sapiens | Mutation(s): 0  Gene Names: IGHE | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01854 (Homo sapiens) Explore P01854  Go to UniProtKB:  P01854 | |||||
PHAROS:  P01854 GTEx:  ENSG00000211891  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01854 | ||||
Glycosylation | |||||
Glycosylation Sites: 1 | Go to GlyGen: P01854-1 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
Immunoglobulin kappa constant | B [auth L], E [auth Y] | 107 | Homo sapiens | Mutation(s): 0  Gene Names: IGKC | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P01834 (Homo sapiens) Explore P01834  Go to UniProtKB:  P01834 | |||||
PHAROS:  P01834 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P01834 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 3 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
High affinity immunoglobulin epsilon receptor subunit alpha | C [auth R] | 171 | Homo sapiens | Mutation(s): 0  Gene Names: FCER1A, FCE1A | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P12319 (Homo sapiens) Explore P12319  Go to UniProtKB:  P12319 | |||||
PHAROS:  P12319 GTEx:  ENSG00000179639  | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P12319 | ||||
Glycosylation | |||||
Glycosylation Sites: 7 | Go to GlyGen: P12319-1 | ||||
Sequence AnnotationsExpand | |||||
|
Entity ID: 4 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | F [auth A], L [auth G] | 5 | N-Glycosylation | ||
Glycosylation Resources | |||||
GlyTouCan:  G22768VO GlyCosmos:  G22768VO GlyGen:  G22768VO |
Entity ID: 5 | |||||
---|---|---|---|---|---|
Molecule | Chains | Length | 2D Diagram | Glycosylation | 3D Interactions |
alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | G [auth B], H [auth C] | 5 | N-Glycosylation | ||
Glycosylation Resources | |||||
GlyTouCan:  G21381MC GlyCosmos:  G21381MC GlyGen:  G21381MC |
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
NAG Query on NAG | M [auth R], N [auth R] | 2-acetamido-2-deoxy-beta-D-glucopyranose C8 H15 N O6 OVRNDRQMDRJTHS-FMDGEEDCSA-N |
Task | Software Package | Version |
---|---|---|
RECONSTRUCTION | cryoSPARC |
Funding Organization | Location | Grant Number |
---|---|---|
Novo Nordisk Foundation | Denmark | NNF18OC0052105 |
Lundbeckfonden | Denmark | R155-2015-2666 |
Danish Council for Independent Research | Denmark | 0135-00061B |