Compact IF2 allows initiator tRNA accommodation into the P site and gates the ribosome to elongation
Basu, R.S., Sherman, M.B., Gagnon, M.G.(2022) Nat Commun 13: 3388
Experimental Data Snapshot
Starting Model: experimental
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(2022) Nat Commun 13: 3388
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Translation initiation factor IF-2 | A [auth x] | 840 | Pseudomonas aeruginosa PAO1 | Mutation(s): 0  Gene Names: infB, PA4744 | |
UniProt | |||||
Find proteins for Q9HV55 (Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)) Explore Q9HV55  Go to UniProtKB:  Q9HV55 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q9HV55 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GDP (Subject of Investigation/LOI) Query on GDP | B [auth x] | GUANOSINE-5'-DIPHOSPHATE C10 H15 N5 O11 P2 QGWNDRXFNXRZMB-UUOKFMHZSA-N |
Task | Software Package | Version |
---|---|---|
MODEL REFINEMENT | PHENIX | 1.19.2 |
RECONSTRUCTION | cryoSPARC | 3.1.0 |
Funding Organization | Location | Grant Number |
---|---|---|
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | R01GM136936 |
Robert A. Welch Foundation | United States | H-2032-20200401 |