7D60

Cryo-EM Structure of human CALHM5 in the presence of rubidium red


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.61 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Cryo-EM structures of human calcium homeostasis modulator 5.

Liu, J.Wan, F.Jin, Q.Li, X.Bhat, E.A.Guo, J.Lei, M.Guan, F.Wu, J.Ye, S.

(2020) Cell Discov 6: 81-81


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Calcium homeostasis modulator protein 5
A, B, C, D, E
A, B, C, D, E, F, G, H, I, J, K
288Homo sapiensMutation(s): 0 
Gene Names: CALHM5C6orf188FAM26E
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for Q8N5C1 (Homo sapiens)
Explore Q8N5C1 
Go to UniProtKB:  Q8N5C1
PHAROS:  Q8N5C1
GTEx:  ENSG00000178033 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8N5C1
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
PA8
Query on PA8

Download Ideal Coordinates CCD File 
AA [auth D]
AB [auth I]
BA [auth D]
BB [auth I]
CA [auth D]
AA [auth D],
AB [auth I],
BA [auth D],
BB [auth I],
CA [auth D],
CB [auth I],
DA [auth D],
DB [auth I],
EA [auth D],
EB [auth J],
FA [auth E],
FB [auth J],
GA [auth E],
GB [auth J],
HA [auth E],
HB [auth J],
IA [auth E],
IB [auth J],
JA [auth E],
JB [auth K],
KA [auth F],
KB [auth K],
L [auth A],
LA [auth F],
LB [auth K],
M [auth A],
MA [auth F],
MB [auth K],
N [auth A],
NA [auth F],
NB [auth K],
O [auth A],
OA [auth F],
P [auth A],
PA [auth G],
Q [auth B],
QA [auth G],
R [auth B],
RA [auth G],
S [auth B],
SA [auth G],
T [auth B],
TA [auth G],
U [auth B],
UA [auth H],
V [auth C],
VA [auth H],
W [auth C],
WA [auth H],
X [auth C],
XA [auth H],
Y [auth C],
YA [auth H],
Z [auth C],
ZA [auth I]
1,2-DIOCTANOYL-SN-GLYCERO-3-PHOSPHATE
C19 H36 O8 P
XYSBQYUENLDGMI-QGZVFWFLSA-M
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.61 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Ministry of Science and Technology (MoST, China)China2016YFA0500404
Ministry of Science and Technology (MoST, China)China2018YFA0508100
National Natural Science Foundation of China (NSFC)China31525001
National Natural Science Foundation of China (NSFC)China31971127
National Natural Science Foundation of China (NSFC)China31870724
National Natural Science Foundation of China (NSFC)China31900041
National Natural Science Foundation of China (NSFC)China31525007
National Natural Science Foundation of China (NSFC)China31930063

Revision History  (Full details and data files)

  • Version 1.0: 2020-12-23
    Type: Initial release
  • Version 1.1: 2024-10-16
    Changes: Data collection, Database references, Structure summary