Structure of sucrose-6-phosphate hydrolase from Lactobacillus gasseri
Lima, M.Z.T., Muniz, J.R.C.To be published.
Experimental Data Snapshot
Starting Model: experimental
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wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Sucrose-6-phosphate hydrolase | 489 | Lactobacillus gasseri 224-1 | Mutation(s): 0  Gene Names: HMPREF9209_2365 EC: 3.2.1.26 | ||
UniProt | |||||
Find proteins for D1YK18 (Lactobacillus gasseri 224-1) Explore D1YK18  Go to UniProtKB:  D1YK18 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | D1YK18 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
TRS Query on TRS | C [auth A] | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C4 H12 N O3 LENZDBCJOHFCAS-UHFFFAOYSA-O | |||
EDO Query on EDO | B [auth A], D [auth A], E [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
NA Query on NA | F [auth A], G [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 103.149 | α = 90 |
b = 103.149 | β = 90 |
c = 101.978 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
Aimless | data scaling |
SAINT | data reduction |
PHASER | phasing |
Funding Organization | Location | Grant Number |
---|---|---|
Sao Paulo Research Foundation (FAPESP) | Brazil | 2017/16291-5 |
Brazilian National Council for Scientific and Technological Development (CNPq) | Brazil | 309767/2015-6 |
Brazilian National Council for Scientific and Technological Development (CNPq) | Brazil | 486546/2013-6 |
Brazilian National Council for Scientific and Technological Development (CNPq) | Brazil | 308865/2018-9 |