Crystal structure of Oxidoreductase, 2OG-Fe(II) oxygenase family, from Burkholderia pseudomallei
Abendroth, J., Horanyi, P.S., Lorimer, D., Edwards, T.E.To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Oxidoreductase, 2OG-Fe(II) oxygenase family | 237 | Burkholderia pseudomallei 1710b | Mutation(s): 0  Gene Names: BURPS1710b_A2398 | ||
UniProt | |||||
Find proteins for Q3JFV4 (Burkholderia pseudomallei (strain 1710b)) Explore Q3JFV4  Go to UniProtKB:  Q3JFV4 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q3JFV4 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 2 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
FE Query on FE | E [auth A], G [auth B], H [auth C], J [auth D] | FE (III) ION Fe VTLYFUHAOXGGBS-UHFFFAOYSA-N | |||
CL Query on CL | F [auth A], I [auth C] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Modified Residues 1 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
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a = 47.03 | α = 77.66 |
b = 54.99 | β = 87.03 |
c = 112.1 | γ = 64.73 |
Software Name | Purpose |
---|---|
XDS | data reduction |
XSCALE | data scaling |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
PHASER | phasing |
ARP/wARP | model building |
Coot | model building |