4TYP

Crystal structure of an adenylate kinase mutant--AKm1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.90 Å
  • R-Value Free: 0.329 
  • R-Value Work: 0.288 
  • R-Value Observed: 0.290 

Starting Model: experimental
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This is version 1.1 of the entry. See complete history


Literature

Crystal structures of thermally stable adenylate kinase mutants designed by local structural entropy optimization and structure-guided mutagenesis

Moon, S.Bae, E.

(2014) J Korean Soc Appl Biological Chem 57: 661-665


Macromolecules
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Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Adenylate kinaseA [auth C],
B,
C [auth A],
D
217Bacillus subtilis subsp. subtilis str. 168Mutation(s): 41 
Gene Names: adkBSU01370
EC: 2.7.4.3
UniProt
Find proteins for P16304 (Bacillus subtilis (strain 168))
Explore P16304 
Go to UniProtKB:  P16304
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP16304
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.90 Å
  • R-Value Free: 0.329 
  • R-Value Work: 0.288 
  • R-Value Observed: 0.290 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 43.641α = 90
b = 123.338β = 98.28
c = 86.693γ = 90
Software Package:
Software NamePurpose
REFMACrefinement

Structure Validation

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Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2014-11-26
    Type: Initial release
  • Version 1.1: 2023-11-08
    Changes: Data collection, Database references, Derived calculations, Refinement description, Source and taxonomy