3RND

W116I-OYE1 complexed with 2-(Hydroxymethyl)-cyclopent-2-enone


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.40 Å
  • R-Value Free: 0.168 
  • R-Value Work: 0.150 
  • R-Value Observed: 0.151 

Starting Model: experimental
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wwPDB Validation   3D Report Full Report


Ligand Structure Quality Assessment 


This is version 1.3 of the entry. See complete history


Literature

Biocatalytic Reductions of Baylis-Hillman Adducts

Walton, A.Z.Conerly, W.C.Pompeu, Y.A.Sullivan, B.T.Stewart, J.D.

(2011) ACS Catal 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
NADPH dehydrogenase 1399Saccharomyces pastorianusMutation(s): 1 
Gene Names: OYE1
EC: 1.6.99.1
UniProt
Find proteins for Q02899 (Saccharomyces pastorianus)
Explore Q02899 
Go to UniProtKB:  Q02899
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ02899
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.40 Å
  • R-Value Free: 0.168 
  • R-Value Work: 0.150 
  • R-Value Observed: 0.151 
  • Space Group: P 43 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 141.18α = 90
b = 141.18β = 90
c = 42.789γ = 90
Software Package:
Software NamePurpose
CBASSdata collection
PHENIXmodel building
PHENIXrefinement
HKL-3000data reduction
HKL-3000data scaling
PHENIXphasing

Structure Validation

View Full Validation Report



Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2011-08-03
    Type: Initial release
  • Version 1.1: 2011-08-17
    Changes: Derived calculations
  • Version 1.2: 2011-11-16
    Changes: Atomic model
  • Version 1.3: 2023-09-13
    Changes: Data collection, Database references, Derived calculations, Refinement description