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PRD_900049

H type 1 antigen, beta anomer

Created:2020-05-08
Last modified:  2020-07-29

PRD_900049 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 1ZI5.

Chemical Details
Formal Charge0
Atom Count71
Chiral Atom Count15
Bond Count73
Aromatic Bond Count0
2D diagram of PRD_900049
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Chemical Component Summary
NameH type 1 antigen, beta anomer
Systematic Name (OpenEye OEToolkits)N-[6-(hydroxymethyl)-4-[6-(hydroxymethyl)-3-[6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-4,5-bis(oxidanyl)oxan-2-yl]oxy- 2,5-bis(oxidanyl)oxan-3-yl]ethanamide
FormulaC20 H35 N O15
Molecular Weight529.49
TypeSACCHARIDE
Chemical Descriptors
TypeProgramVersionDescriptor
SMILESACDLabs12.01O=C(NC3C(OC2OC(C(O)C(O)C2OC1OC(C)C(O)C(O)C1O)CO)C(O)C(OC3O)CO)C
SMILESCACTVS3.370C[CH]1O[CH](O[CH]2[CH](O)[CH](O)[CH](CO)O[CH]2O[CH]3[CH](O)[CH](CO)O[CH](O)[CH]3NC(C)=O)[CH](O)[CH](O)[CH]1O
SMILESOpenEye OEToolkits1.7.6CC1C(C(C(C(O1)OC2C(C(C(OC2OC3C(C(OC(C3O)CO)O)NC(=O)C)CO)O)O)O)O)O
Canonical SMILESCACTVS3.370 C[C@@H]1O[C@@H](O[C@@H]2[C@@H](O)[C@@H](O)[C@@H](CO)O[C@H]2O[C@H]3[C@H](O)[C@@H](CO)O[C@@H](O)[C@@H]3NC(C)=O)[C@@H](O)[ C@H](O)[C@@H]1O
Canonical SMILESOpenEye OEToolkits1.7.6 CC1C(C(C(C(O1)OC2C(C(C(OC2OC3C(C(OC(C3O)CO)O)NC(=O)C)CO)O)O)O)O)O
InChIInChI1.03 InChI=1S/C20H35NO15/c1-5-10(25)13(28)15(30)19(32-5)36-17-14(29)11(26)7(3-22)34-20(17)35-16-9(21-6(2)24)18(31)33-8(4-23) 12(16)27/h5,7-20,22-23,25-31H,3-4H2,1-2H3,(H,21,24)/t5-,7+,8+,9+,10+,11-,12+,13+,14-,15-,16+,17+,18+,19-,20-/m0/s1
InChIKeyInChI1.03 MGSDFCKWGHNUSM-QVPNGJTFSA-N
Drug Info: DrugBank

DrugBank data are sourced from datasets licensed under a Creative Common's Attribution-NonCommercial 4.0 International License

DrugBank IDDB04679 
NameHuman blood group H type 1 trisaccharide
Groups experimental
Synonyms
  • αLFuc(1-2)βDGal(1-3)βDGlcNAc
  • alpha-L-Fucp-(1->2)-beta-D-Galp-(1->3)-beta-D-GlcpNAc
  • Human blood group H type 1 trisaccharide
  • H type I epitope
  • H type I trisaccharide
Categories
  • Antigens
  • Antigens, Neoplasm
  • Biological Factors
  • Biomarkers
  • Biomarkers, Tumor

Drug Targets

DrugBank data are sourced from datasets licensed under a Creative Common's Attribution-NonCommercial 4.0 International License
NameTarget SequencePharmacological ActionActions
Histo-blood group ABO system transferaseMAEVLRTLAGKPKCHALRPMILFLIMLVLVLFGYGVLSPRSLMPGSLERG...unknown
Drug Info/Drug Targets: DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. Nucleic Acids Res. 2011 Jan; 39 (Database issue):D1035-41. | PMID:21059682

Related Resource References

Resource NameReference
PubChem 5326971
ChEBI CHEBI:59296