PRD_900026

HEPARIN DISACCHARIDE I-S,

Created:2020-05-08
Last modified:  2020-07-29

PRD_900026 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 1U4L.

Chemical Details
Formal Charge0
Atom Count50
Chiral Atom Count8
Bond Count51
Aromatic Bond Count0
2D diagram of PRD_900026
Toggle HydrogenToggle Labels
Chemical Component Summary
NameHEPARIN DISACCHARIDE I-S,
Systematic Name (OpenEye OEToolkits)(2R,3R,4S)-2-[(2R,3S,4R,5R,6S)-4,6-bis(oxidanyl)-5-(sulfonatoamino)-2-(sulfonatooxymethyl)oxan-3-yl]oxy-4-oxidanyl-3-su lfonatooxy-3,4-dihydro-2H-pyran-6-carboxylate
FormulaC12 H15 N O19 S3
Molecular Weight573.438
TypeSACCHARIDE
Chemical Descriptors
TypeProgramVersionDescriptor
SMILESACDLabs12.01[O-]S(=O)(=O)OC2C(O)C=C(OC2OC1C(OC(O)C(NS([O-])(=O)=O)C1O)COS([O-])(=O)=O)C([O-])=O
SMILESCACTVS3.370O[CH]1O[CH](CO[S]([O-])(=O)=O)[CH](O[CH]2OC(=C[CH](O)[CH]2O[S]([O-])(=O)=O)C([O-])=O)[CH](O)[CH]1N[S]([O-])(=O)=O
SMILESOpenEye OEToolkits1.7.2C1=C(OC(C(C1O)OS(=O)(=O)[O-])OC2C(OC(C(C2O)NS(=O)(=O)[O-])O)COS(=O)(=O)[O-])C(=O)[O-]
Canonical SMILESCACTVS3.370 O[C@H]1O[C@H](CO[S]([O-])(=O)=O)[C@@H](O[C@@H]2OC(=C[C@H](O)[C@H]2O[S]([O-])(=O)=O)C([O-])=O)[C@H](O)[C@H]1N[S]([O-])(= O)=O
Canonical SMILESOpenEye OEToolkits1.7.2 C1=C(O[C@H]([C@@H]([C@H]1O)OS(=O)(=O)[O-])O[C@@H]2[C@H](O[C@@H]([C@@H]([C@H]2O)NS(=O)(=O)[O-])O)COS(=O)(=O)[O-])C(=O)[O -]
InChIInChI1.03 InChI=1S/C12H19NO19S3/c14-3-1-4(10(16)17)30-12(8(3)32-35(25,26)27)31-9-5(2-28-34(22,23)24)29-11(18)6(7(9)15)13-33(19,20 )21/h1,3,5-9,11-15,18H,2H2,(H,16,17)(H,19,20,21)(H,22,23,24)(H,25,26,27)/p-4/t3-,5+,6+,7+,8+,9+,11-,12-/m0/s1
InChIKeyInChI1.03 LRPGJWKAYQRIAQ-GYBHJADLSA-J
Drug Info: DrugBank

DrugBank data are sourced from datasets licensed under a Creative Common's Attribution-NonCommercial 4.0 International License

DrugBank IDDB02322 
NameHeparin Disaccharide I-S
Groups experimental
SynonymsHeparin Disaccharide I-S

Drug Targets

DrugBank data are sourced from datasets licensed under a Creative Common's Attribution-NonCommercial 4.0 International License
NameTarget SequencePharmacological ActionActions
C-C motif chemokine 5MKVSAAALAVILIATALCAPASASPYSSDTTPCCFAYIARPLPRAHIKEY...unknown
Drug Info/Drug Targets: DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. Nucleic Acids Res. 2011 Jan; 39 (Database issue):D1035-41. | PMID:21059682

Related Resource References

Resource NameReference
PubChem 5288499
ChEBI CHEBI:43053