PRD_002605

Carmaphycin B, bound form

Created:	2026-08-26
Last modified:	2026-11-04

PRD_002605 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is PDB_00009SDR.

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1 entry where PRD_002605 is present

Chemical Details
Formal Charge	0
Atom Count	83
Chiral Atom Count	4
Bond Count	82
Aromatic Bond Count	0

2D diagram of PRD_002605

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Chemical Component Summary
Name	Carmaphycin B, bound form
Systematic Name (OpenEye OEToolkits)	~{N}-[(2~{S})-1-[[(2~{S})-1-[[(2~{S},4~{S})-2,6-dimethyl-1-oxidanyl-3-oxidanylidene-heptan-4-yl]amino]-4-methylsulfonyl-1-oxidanylidene-butan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]hexanamide
Formula	C₂₅ H₄₇ N₃ O₇ S
Molecular Weight	533.722
Type	PEPTIDE-LIKE

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	CACTVS	3.385	CCCCCC(=O)N[CH](C(C)C)C(=O)N[CH](CC[S](C)(=O)=O)C(=O)N[CH](CC(C)C)C(=O)[CH](C)CO
SMILES	OpenEye OEToolkits	2.0.7	CCCCCC(=O)NC(C(C)C)C(=O)NC(CCS(=O)(=O)C)C(=O)NC(CC(C)C)C(=O)C(C)CO
Canonical SMILES	CACTVS	3.385	CCCCCC(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CC[S](C)(=O)=O)C(=O)N[C@@H](CC(C)C)C(=O)[C@@H](C)CO
Canonical SMILES	OpenEye OEToolkits	2.0.7	CCCCCC(=O)N[C@@H](C(C)C)C(=O)N[C@@H](CCS(=O)(=O)C)C(=O)N[C@@H](CC(C)C)C(=O)[C@@H](C)CO