PRD_002583

Peptidoglycan disaccharide tetrapeptide

Created:2024-10-05
Last modified:  2024-10-16

PRD_002583 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 8PXY.

Chemical Details
Formal Charge0
Atom Count128
Chiral Atom Count16
Bond Count129
Aromatic Bond Count0
2D diagram of PRD_002583
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Chemical Component Summary
NamePeptidoglycan disaccharide tetrapeptide
Systematic Name (OpenEye OEToolkits)(2~{R})-2-[[(2~{S},6~{R})-2-[[(4~{R})-4-[[(2~{S})-2-[[(2~{R})-2-[(2~{R},3~{S},4~{R},5~{R},6~{S})-5-acetamido-3-[(2~{R},3~{R},4~{R},5~{S},6~{R})-3-acetamido-6-(hydroxymethyl)-4,5-bis(oxidanyl)oxan-2-yl]oxy-2-(hydroxymethyl)-6-oxidanyl-oxan-4-yl]oxypropanoyl]amino]propanoyl]amino]-5-azanyl-5-oxidanylidene-pentanoyl]amino]-6,7-bis(azanyl)-7-oxidanylidene-heptanoyl]amino]propanoic acid
FormulaC37 H63 N9 O19
Molecular Weight937.945
TypePEPTIDE-LIKE
Chemical Descriptors
TypeProgramVersionDescriptor
SMILESCACTVS3.385C[CH](NC(=O)[CH](CCC[CH](N)C(N)=O)NC(=O)CC[CH](NC(=O)[CH](C)NC(=O)[CH](C)O[CH]1[CH](NC(C)=O)[CH](O)O[CH](CO)[CH]1O[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2NC(C)=O)C(N)=O)C(O)=O
SMILESOpenEye OEToolkits2.0.7CC(C(=O)NC(CCC(=O)NC(CCCC(C(=O)N)N)C(=O)NC(C)C(=O)O)C(=O)N)NC(=O)C(C)OC1C(C(OC(C1OC2C(C(C(C(O2)CO)O)O)NC(=O)C)CO)O)NC(=O)C
Canonical SMILESCACTVS3.385 C[C@@H](NC(=O)[C@H](CCC[C@@H](N)C(N)=O)NC(=O)CC[C@@H](NC(=O)[C@H](C)NC(=O)[C@@H](C)O[C@@H]1[C@@H](NC(C)=O)[C@@H](O)O[C@H](CO)[C@H]1O[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2NC(C)=O)C(N)=O)C(O)=O
Canonical SMILESOpenEye OEToolkits2.0.7 C[C@@H](C(=O)N[C@H](CCC(=O)N[C@@H](CCC[C@H](C(=O)N)N)C(=O)N[C@H](C)C(=O)O)C(=O)N)NC(=O)[C@@H](C)O[C@@H]1[C@H]([C@H](O[C@@H]([C@H]1O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)NC(=O)C)CO)O)NC(=O)C