PRD_002577

AF23 peptide

Created:	2025-07-10
Last modified:	2026-05-20

PRD_002577 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is PDB_00009PG4.

Find Related PDB Entries
1 entry where PRD_002577 is present

Chemical Details
Formal Charge	0
Atom Count	76
Chiral Atom Count	3
Bond Count	77
Aromatic Bond Count	12

2D diagram of PRD_002577

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	AF23 peptide
Systematic Name (OpenEye OEToolkits)	(2~{S})-2-azanyl-~{N}-[(2~{S})-1-[[(2~{S})-1-azanyl-1-oxidanylidene-3-phenyl-propan-2-yl]amino]-3-(3-nitro-4-oxidanyl-phenyl)-1-oxidanylidene-propan-2-yl]-5-[[~{N}-[2,2,2-tris(fluoranyl)ethyl]carbamimidoyl]amino]pentanamide
Formula	C₂₆ H₃₃ F₃ N₈ O₆
Molecular Weight	610.585
Type	PEPTIDE-LIKE

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	14.52	O=[N+]([O-])c1cc(ccc1O)CC(NC(=O)C(N)CCCNC(=N)NCC(F)(F)F)C(=O)NC(Cc1ccccc1)C(N)=O
SMILES	CACTVS	3.385	N[CH](CCCNC(=N)NCC(F)(F)F)C(=O)N[CH](Cc1ccc(O)c(c1)[N+]([O-])=O)C(=O)N[CH](Cc2ccccc2)C(N)=O
SMILES	OpenEye OEToolkits	3.1.0.0	c1ccc(cc1)CC(C(=O)N)NC(=O)C(Cc2ccc(c(c2)[N+](=O)[O-])O)NC(=O)C(CCCNC(=N)NCC(F)(F)F)N
Canonical SMILES	CACTVS	3.385	N[C@@H](CCCNC(=N)NCC(F)(F)F)C(=O)N[C@@H](Cc1ccc(O)c(c1)[N+]([O-])=O)C(=O)N[C@@H](Cc2ccccc2)C(N)=O
Canonical SMILES	OpenEye OEToolkits	3.1.0.0	c1ccc(cc1)C[C@@H](C(=O)N)NC(=O)[C@H](Cc2ccc(c(c2)[N+](=O)[O-])O)NC(=O)[C@H](CCCNC(=N)NCC(F)(F)F)N

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.