PRD_002540

evybactin

Created:2024-07-25
Last modified:  2024-10-02

PRD_002540 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 7UGW.

Chemical Details
Formal Charge0
Atom Count197
Chiral Atom Count13
Bond Count201
Aromatic Bond Count21
2D diagram of PRD_002540
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Chemical Component Summary
Nameevybactin
Systematic Name (OpenEye OEToolkits)[[3-[(4~{S},7~{S},10~{R},16~{S},19~{R},23~{S},26~{R},29~{S},30~{R})-29-[[(2~{R})-5-[[azaniumylidene(azanyl)methyl]amino]-2-[[(2~{S},3~{R})-2-[[(2~{S})-2-formamido-3-(1~{H}-indol-3-yl)propanoyl]amino]-3-oxidanyl-butanoyl]amino]pentanoyl]amino]-4,23-dicarboxy-7,19-bis(hydroxymethyl)-30-methyl-26-[(3-methylimidazol-4-yl)methyl]-2,6,9,12,15,18,21,25,28-nonakis(oxidanylidene)-16-(phenylmethyl)-1-oxa-5,8,11,14,17,20,24,27-octazacyclotriacont-10-yl]propylamino]-azanyl-methylidene]azanium
FormulaC64 H91 N21 O21
Molecular Weight1,490.535
TypePEPTIDE-LIKE
Chemical Descriptors
TypeProgramVersionDescriptor
SMILESACDLabs12.01CC(O)C(NC(=O)C(Cc1c[NH]c2ccccc12)NC=O)C(=O)NC(CCCNC(=[NH2+])N)C(=O)NC1C(=O)NC(Cc2cncn2C)C(=O)NC(CC(=O)NC(CO)C(=O)NC(Cc2ccccc2)C(=O)NCC(=O)NC(CCCNC(=[NH2+])N)C(=O)NC(CO)C(=O)NC(CC(=O)OC1C)C(=O)O)C(=O)O
SMILESCACTVS3.385C[CH](O)[CH](NC(=O)[CH](Cc1c[nH]c2ccccc12)NC=O)C(=O)N[CH](CCCNC(N)=[NH2+])C(=O)N[CH]3[CH](C)OC(=O)C[CH](NC(=O)[CH](CO)NC(=O)[CH](CCCNC(N)=[NH2+])NC(=O)CNC(=O)[CH](Cc4ccccc4)NC(=O)[CH](CO)NC(=O)C[CH](NC(=O)[CH](Cc5cncn5C)NC3=O)C(O)=O)C(O)=O
SMILESOpenEye OEToolkits2.0.7CC1C(C(=O)NC(C(=O)NC(CC(=O)NC(C(=O)NC(C(=O)NCC(=O)NC(C(=O)NC(C(=O)NC(CC(=O)O1)C(=O)O)CO)CCCNC(=[NH2+])N)Cc2ccccc2)CO)C(=O)O)Cc3cncn3C)NC(=O)C(CCCNC(=[NH2+])N)NC(=O)C(C(C)O)NC(=O)C(Cc4c[nH]c5c4cccc5)NC=O
Canonical SMILESCACTVS3.385 C[C@@H](O)[C@H](NC(=O)[C@H](Cc1c[nH]c2ccccc12)NC=O)C(=O)N[C@H](CCCNC(N)=[NH2+])C(=O)N[C@H]3[C@@H](C)OC(=O)C[C@H](NC(=O)[C@H](CO)NC(=O)[C@@H](CCCNC(N)=[NH2+])NC(=O)CNC(=O)[C@H](Cc4ccccc4)NC(=O)[C@@H](CO)NC(=O)C[C@H](NC(=O)[C@@H](Cc5cncn5C)NC3=O)C(O)=O)C(O)=O
Canonical SMILESOpenEye OEToolkits2.0.7 C[C@@H]1[C@@H](C(=O)N[C@@H](C(=O)N[C@@H](CC(=O)N[C@@H](C(=O)N[C@H](C(=O)NCC(=O)N[C@@H](C(=O)N[C@H](C(=O)N[C@@H](CC(=O)O1)C(=O)O)CO)CCCNC(=[NH2+])N)Cc2ccccc2)CO)C(=O)O)Cc3cncn3C)NC(=O)[C@@H](CCCNC(=[NH2+])N)NC(=O)[C@H]([C@@H](C)O)NC(=O)[C@H](Cc4c[nH]c5c4cccc5)NC=O