PRD_002430
Darobactin 9
PRD_002430 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).
The representative PDB ID is 8ADI.
Chemical Component Summary | |
|---|---|
| Name | Darobactin 9 |
| Identifiers | 3-[(17~{S},20~{S},23~{S},26~{S},29~{S})-17-azanyl-20-(2-azanyl-2-oxidanylidene-ethyl)-26-(hydroxymethyl)-29-[[(2~{S})-1-[[(2~{S})-3-(1~{H}-indol-3-yl)-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]-3-oxidanyl-1-oxidanylidene-propan-2-yl]carbamoyl]-18,21,24,27-tetrakis(oxidanylidene)-6-oxa-2,13,19,22,25,28-hexazahexacyclo[29.3.1.0^{4,34}.0^{5,23}.0^{7,12}.0^{11,15}]pentatriaconta-1(34),3,7,9,11,14,31(35),32-octaen-30-yl]propylazanium |
| Formula | C49 H57 N12 O12 |
| Molecular Weight | 1,006.05 |
| Type | PEPTIDE-LIKE |
| Isomeric SMILES | c1ccc2c(c1)c(c[nH]2)C[C@@H](C(=O)O)NC(=O)[C@H](CO)NC(=O)[C@@H]3C(c4ccc5c(c4)[nH]cc5C6[C@@H](C(=O)N[C@H](C(=O)N3)CO)NC(=O)[C@@H](NC(=O)[C@H](Cc7c[nH]c8c7cccc8O6)N)CC(=O)N)CCC[NH3+] |
| InChI | InChI=1S/C49H56N12O12/c50-12-4-7-26-22-10-11-28-29(19-54-32(28)14-22)42-41(61-44(66)33(16-38(52)64)56-43(65)30(51)13-23-18-55-39-27(23)6-3-9-37(39)73-42)48(70)59-36(21-63)46(68)60-40(26)47(69)58-35(20-62)45(67)57-34(49(71)72)15-24-17-53-31-8-2-1-5-25(24)31/h1-3,5-6,8-11,14,17-19,26,30,33-36,40-42,53-55,62-63H,4,7,12-13,15-16,20-21,50-51H2,(H2,52,64)(H,56,65)(H,57,67)(H,58,69)(H,59,70)(H,60,68)(H,61,66)(H,71,72)/p+1/t26-,30-,33-,34-,35-,36-,40-,41-,42+/m0/s1 |
| InChIKey | XINCMJVVCJHCMS-JXJNQVOLSA-O |
| Composition | Polymer Sequences: 0AF-ASN-TRP-SER-LYS-SER-TRP |
| BIRD class | ANTIBIOTIC |
| Represented As | POLYMER |
| Compound Details | n/a |
| Description | n/a |
Chemical Details | |
|---|---|
| Formal Charge | 0 |
| Atom Count | 130 |
| Chiral Atom Count | 7 |
| Bond Count | 137 |
| Aromatic Bond Count | 30 |
