PRD_002353

Blood group B type 1 antigen, beta anomer

Created:	2021-08-17
Last modified:	2023-06-11

PRD_002353 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 7P8H.

Find Related PDB Entries
1 entry where PRD_002353 is present

Chemical Details
Formal Charge	0
Atom Count	92
Chiral Atom Count	20
Bond Count	95
Aromatic Bond Count	0

2D diagram of PRD_002353

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Chemical Component Summary
Name	Blood group B type 1 antigen, beta anomer
Systematic Name (OpenEye OEToolkits)	~{N}-[(2~{R},3~{R},4~{R},5~{S},6~{R})-6-(hydroxymethyl)-4-[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-4-[(2~{R},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-3-[(2~{S},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]oxy-5-oxidanyl-oxan-2-yl]oxy-2,5-bis(oxidanyl)oxan-3-yl]ethanamide
Formula	C₂₆ H₄₅ N O₂₀
Molecular Weight	691.63
Type	SACCHARIDE

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	CACTVS	3.385	C[CH]1O[CH](O[CH]2[CH](O[CH](CO)[CH](O)[CH]2O[CH]3O[CH](CO)[CH](O)[CH](O)[CH]3O)O[CH]4[CH](O)[CH](CO)O[CH](O)[CH]4NC(C)=O)[CH](O)[CH](O)[CH]1O
SMILES	OpenEye OEToolkits	2.0.7	CC1C(C(C(C(O1)OC2C(C(C(OC2OC3C(C(OC(C3O)CO)O)NC(=O)C)CO)O)OC4C(C(C(C(O4)CO)O)O)O)O)O)O
Canonical SMILES	CACTVS	3.385	C[C@@H]1O[C@@H](O[C@H]2[C@@H](O[C@H](CO)[C@H](O)[C@@H]2O[C@H]3O[C@H](CO)[C@H](O)[C@H](O)[C@H]3O)O[C@H]4[C@H](O)[C@@H](CO)O[C@@H](O)[C@@H]4NC(C)=O)[C@@H](O)[C@H](O)[C@@H]1O
Canonical SMILES	OpenEye OEToolkits	2.0.7	C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)O[C@@H]2[C@H]([C@H]([C@H](O[C@H]2O[C@@H]3[C@H]([C@@H](O[C@@H]([C@H]3O)CO)O)NC(=O)C)CO)O)O[C@@H]4[C@@H]([C@H]([C@H]([C@H](O4)CO)O)O)O)O)O)O
InChI	InChI	1.06	InChI=1S/C26H45NO20/c1-6-12(32)16(36)18(38)24(41-6)47-22-21(46-25-19(39)17(37)13(33)8(3-28)43-25)15(35)10(5-30)44-26(22)45-20-11(27-7(2)31)23(40)42-9(4-29)14(20)34/h6,8-26,28-30,32-40H,3-5H2,1-2H3,(H,27,31)/t6-,8+,9+,10+,11+,12+,13-,14+,15-,16+,17-,18-,19+,20+,21-,22+,23+,24-,25+,26-/m0/s1
InChIKey	InChI	1.06	UTKJZGYXPDLBQS-STAGDXQRSA-N

Related Resource References

Resource Name	Reference
PubChem	56927779
ChEBI	CHEBI:63242

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.