PRD_002306

Rufomycin I

Created:2018-03-09
Last modified:  2019-06-04

PRD_002306 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 6CN8.

Chemical Details
Formal Charge0
Atom Count152
Chiral Atom Count9
Bond Count156
Aromatic Bond Count16
2D diagram of PRD_002306
Toggle HydrogenToggle Labels
Chemical Component Summary
NameRufomycin I
Systematic Name (OpenEye OEToolkits)(2~{S},5~{S},8~{S},11~{S},14~{S},17~{S},20~{S},22~{S})-5-[(~{E})-but-2-enyl]-10,17,19,22-tetramethyl-8-[[1-[(3~{R})-2-methyl-3-oxidanyl-butan-2-yl]indol-3-yl]methyl]-2,11-bis(2-methylpropyl)-14-[(3-nitro-4-oxidanyl-phenyl)methyl]-23-oxidanyl-1,4,7,10,13,16,19-heptazabicyclo[18.3.1]tetracosane-3,6,9,12,15,18,24-heptone
FormulaC54 H77 N9 O12
Molecular Weight1,044.242
TypePEPTIDE-LIKE
Chemical Descriptors
TypeProgramVersionDescriptor
SMILESACDLabs12.01C(C1NC(C(NC(C(N3C(C(N(C(C(NC(C(NC(C(N(C1=O)C)CC(C)C)=O)Cc2cc(c(cc2)O)[N+]([O-])=O)=O)C)=O)C)CC(C)C3O)=O)CC(C)C)=O)C\C=C\C)=O)c5c4ccccc4n(c5)C(C(C)O)(C)C
SMILESCACTVS3.385CC=CC[CH]1NC(=O)[CH](CC(C)C)[N]2[CH](O)[CH](C)C[CH](N(C)C(=O)[CH](C)NC(=O)[CH](Cc3ccc(O)c(c3)[N+]([O-])=O)NC(=O)[CH](CC(C)C)N(C)C(=O)[CH](Cc4cn(c5ccccc45)C(C)(C)[CH](C)O)NC1=O)C2=O
SMILESOpenEye OEToolkits2.0.7CC=CCC1C(=O)NC(C(=O)N(C(C(=O)NC(C(=O)NC(C(=O)N(C2CC(C(N(C2=O)C(C(=O)N1)CC(C)C)O)C)C)C)Cc3ccc(c(c3)[N+](=O)[O-])O)CC(C)C)C)Cc4cn(c5c4cccc5)C(C)(C)C(C)O
Canonical SMILESCACTVS3.385 C/C=C/C[C@@H]1NC(=O)[C@H](CC(C)C)[N@]2[C@H](O)[C@@H](C)C[C@H](N(C)C(=O)[C@H](C)NC(=O)[C@H](Cc3ccc(O)c(c3)[N+]([O-])=O)NC(=O)[C@H](CC(C)C)N(C)C(=O)[C@H](Cc4cn(c5ccccc45)C(C)(C)[C@@H](C)O)NC1=O)C2=O
Canonical SMILESOpenEye OEToolkits2.0.7 C/C=C/C[C@H]1C(=O)N[C@H](C(=O)N([C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N([C@H]2C[C@@H](C(N(C2=O)[C@H](C(=O)N1)CC(C)C)O)C)C)C)Cc3ccc(c(c3)[N+](=O)[O-])O)CC(C)C)C)Cc4cn(c5c4cccc5)C(C)(C)[C@@H](C)O
InChIInChI1.06 InChI=1S/C54H77N9O12/c1-13-14-18-37-46(66)58-39(27-35-28-61(54(9,10)33(8)64)40-19-16-15-17-36(35)40)52(72)59(11)42(22-29(2)3)48(68)57-38(25-34-20-21-45(65)41(26-34)63(74)75)47(67)55-32(7)51(71)60(12)44-24-31(6)50(70)62(53(44)73)43(23-30(4)5)49(69)56-37/h13-17,19-21,26,28-33,37-39,42-44,50,64-65,70H,18,22-25,27H2,1-12H3,(H,55,67)(H,56,69)(H,57,68)(H,58,66)/b14-13+/t31-,32-,33+,37-,38-,39-,42-,43-,44-,50+/m0/s1
InChIKeyInChI1.06 INOZVACIAGQCKI-JCFPFECDSA-N

Related Resource References

Resource NameReference
PubChem 138393317