PRD_001148

BIVALIRUDIN C-terminus fragment

Created:	2013-08-19
Last modified:	2013-09-04

PRD_001148 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 3VXE.

Find Related PDB Entries
9 entries where PRD_001148 is present

Chemical Details
Formal Charge	0
Atom Count	61
Chiral Atom Count	3
Bond Count	62
Aromatic Bond Count	6

2D diagram of PRD_001148

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	BIVALIRUDIN C-terminus fragment
Systematic Name (OpenEye OEToolkits)	[azanyl-[[(4S)-4-[[(2S)-1-[(2R)-2-azanyl-3-phenyl-propanoyl]pyrrolidin-2-yl]carbonylamino]-5-oxidanyl-5-oxidanylidene-pentyl]amino]methylidene]azanium
Formula	C₂₀ H₃₁ N₆ O₄
Molecular Weight	419.498
Type	PEPTIDE-LIKE

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	O=C(NC(C(=O)O)CCCNC(=[NH2+])\N)C2N(C(=O)C(N)Cc1ccccc1)CCC2
SMILES	CACTVS	3.385	N[CH](Cc1ccccc1)C(=O)N2CCC[CH]2C(=O)N[CH](CCCNC(N)=[NH2+])C(O)=O
SMILES	OpenEye OEToolkits	1.7.6	c1ccc(cc1)CC(C(=O)N2CCCC2C(=O)NC(CCCNC(=[NH2+])N)C(=O)O)N
Canonical SMILES	CACTVS	3.385	N[C@H](Cc1ccccc1)C(=O)N2CCC[C@H]2C(=O)N[C@@H](CCCNC(N)=[NH2+])C(O)=O
Canonical SMILES	OpenEye OEToolkits	1.7.6	c1ccc(cc1)C[C@H](C(=O)N2CCC[C@H]2C(=O)N[C@@H](CCCNC(=[NH2+])N)C(=O)O)N
InChI	InChI	1.03	InChI=1S/C20H30N6O4/c21-14(12-13-6-2-1-3-7-13)18(28)26-11-5-9-16(26)17(27)25-15(19(29)30)8-4-10-24-20(22)23/h1-3,6-7,14-16H,4-5,8-12,21H2,(H,25,27)(H,29,30)(H4,22,23,24)/p+1/t14-,15+,16+/m1/s1
InChIKey	InChI	1.03	NTUPOKHATNSWCY-PMPSAXMXSA-O

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.