PRD_001127

GRAMICIDIN A

Created:2013-06-30
Last modified:  2013-07-10

PRD_001127 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 1NT5.

Chemical Details
Formal Charge0
Atom Count280
Chiral Atom Count14
Bond Count288
Aromatic Bond Count46
2D diagram of PRD_001127
Toggle HydrogenToggle Labels
Chemical Component Summary
NameGRAMICIDIN A
Systematic Name (OpenEye OEToolkits)(2R)-2-[[(2S)-2-[2-[[(2S)-2-formamido-3-phenyl-propanoyl]amino]ethanoylamino]propanoyl]amino]-N-[(2S)-1-[[(2R)-1-[[(2S)-1-[[(2R)-1-[[(2S)-1-[[(2R)-1-[[(2S)-1-[[(2R)-1-[[(2S)-1-[[(2R)-1-[[(2S)-1-(2-hydroxyethylamino)-3-(1H-indol-3-yl)-1-oxidanylidene-propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-3-(1H-indol-3-yl)-1-oxidanylidene-propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-3-(1H-indol-3-yl)-1-oxidanylidene-propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-3-(1H-indol-3-yl)-1-oxidanylidene-propan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]-4-methyl-pentanamide
FormulaC103 H140 N20 O17
Molecular Weight1,930.337
TypePEPTIDE-LIKE
Chemical Descriptors
TypeProgramVersionDescriptor
SMILESCACTVS3.385CC(C)C[CH](NC(=O)[CH](C)NC(=O)CNC(=O)[CH](Cc1ccccc1)NC=O)C(=O)N[CH](C)C(=O)N[CH](C(C)C)C(=O)N[CH](C(C)C)C(=O)N[CH](C(C)C)C(=O)N[CH](Cc2c[nH]c3ccccc23)C(=O)N[CH](CC(C)C)C(=O)N[CH](Cc4c[nH]c5ccccc45)C(=O)N[CH](CC(C)C)C(=O)N[CH](Cc6c[nH]c7ccccc67)C(=O)N[CH](CC(C)C)C(=O)N[CH](Cc8c[nH]c9ccccc89)C(=O)NCCO
SMILESOpenEye OEToolkits1.7.6CC(C)CC(C(=O)NC(C)C(=O)NC(C(C)C)C(=O)NC(C(C)C)C(=O)NC(C(C)C)C(=O)NC(Cc1c[nH]c2c1cccc2)C(=O)NC(CC(C)C)C(=O)NC(Cc3c[nH]c4c3cccc4)C(=O)NC(CC(C)C)C(=O)NC(Cc5c[nH]c6c5cccc6)C(=O)NC(CC(C)C)C(=O)NC(Cc7c[nH]c8c7cccc8)C(=O)NCCO)NC(=O)C(C)NC(=O)CNC(=O)C(Cc9ccccc9)NC=O
Canonical SMILESCACTVS3.385 CC(C)C[C@@H](NC(=O)[C@H](C)NC(=O)CNC(=O)[C@H](Cc1ccccc1)NC=O)C(=O)N[C@@H](C)C(=O)N[C@H](C(C)C)C(=O)N[C@@H](C(C)C)C(=O)N[C@H](C(C)C)C(=O)N[C@@H](Cc2c[nH]c3ccccc23)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc4c[nH]c5ccccc45)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc6c[nH]c7ccccc67)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc8c[nH]c9ccccc89)C(=O)NCCO
Canonical SMILESOpenEye OEToolkits1.7.6 C[C@@H](C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](C)C(=O)N[C@H](C(C)C)C(=O)N[C@@H](C(C)C)C(=O)N[C@H](C(C)C)C(=O)N[C@@H](Cc1c[nH]c2c1cccc2)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc3c[nH]c4c3cccc4)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc5c[nH]c6c5cccc6)C(=O)N[C@H](CC(C)C)C(=O)N[C@@H](Cc7c[nH]c8c7cccc8)C(=O)NCCO)NC(=O)CNC(=O)[C@H](Cc9ccccc9)NC=O
InChIInChI1.03 InChI=1S/C103H140N20O17/c1-55(2)40-78(113-90(127)62(15)111-86(126)53-109-92(129)77(110-54-125)44-64-28-18-17-19-29-64)94(131)112-63(16)91(128)121-88(60(11)12)102(139)123-89(61(13)14)103(140)122-87(59(9)10)101(138)120-85(48-68-52-108-76-37-27-23-33-72(68)76)100(137)116-81(43-58(7)8)97(134)119-84(47-67-51-107-75-36-26-22-32-71(67)75)99(136)115-80(42-57(5)6)96(133)118-83(46-66-50-106-74-35-25-21-31-70(66)74)98(135)114-79(41-56(3)4)95(132)117-82(93(130)104-38-39-124)45-65-49-105-73-34-24-20-30-69(65)73/h17-37,49-52,54-63,77-85,87-89,105-108,124H,38-48,53H2,1-16H3,(H,104,130)(H,109,129)(H,110,125)(H,111,126)(H,112,131)(H,113,127)(H,114,135)(H,115,136)(H,116,137)(H,117,132)(H,118,133)(H,119,134)(H,120,138)(H,121,128)(H,122,140)(H,123,139)/t62-,63-,77-,78+,79+,80+,81+,82-,83-,84-,85-,87+,88+,89-/m0/s1
InChIKeyInChI1.03 ZHRUOGFTNZJSMT-XMRHHNLNSA-N

Related Resource References

Resource NameReference
PubChem 101701094