PRD_001126

Selenomethionine derivative of Microcin C7

Created:	2013-06-26
Last modified:	2013-06-26

PRD_001126 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 3H9Q.

Find Related PDB Entries
2 entries where PRD_001126 is present

Chemical Details
Formal Charge	0
Atom Count	103
Chiral Atom Count	7
Bond Count	102
Aromatic Bond Count	0

2D diagram of PRD_001126

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Chemical Component Summary
Name	Selenomethionine derivative of Microcin C7
Systematic Name (OpenEye OEToolkits)	[azanyl-[[(4S)-5-[[(2S,3R)-1-[[2-[[(2S)-4-azanyl-1-[[(2S)-1-[[(2S)-4-azanyl-1-oxidanyl-1,4-bis(oxidanylidene)butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]amino]-1,4-bis(oxidanylidene)butan-2-yl]amino]-2-oxidanylidene-ethyl]amino]-3-oxidanyl-1-oxidanylidene-butan-2-yl]amino]-4-[[(2S)-2-azanyl-4-methylselanyl-butanoyl]amino]-5-oxidanylidene-pentyl]amino]methylidene]azanium
Formula	C₂₈ H₅₁ N₁₂ O₁₁ Se
Molecular Weight	810.738
Type	PEPTIDE-LIKE

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	O=C(NC(C(=O)NC(C(=O)NCC(=O)NC(C(=O)NC(C(=O)NC(C(=O)O)CC(=O)N)C)CC(=O)N)C(O)C)CCCNC(=[NH2+])/N)C(N)CC[Se]C
SMILES	CACTVS	3.385	C[Se]CC[CH](N)C(=O)N[CH](CCCNC(N)=[NH2+])C(=O)N[CH]([CH](C)O)C(=O)NCC(=O)N[CH](CC(N)=O)C(=O)N[CH](C)C(=O)N[CH](CC(N)=O)C(O)=O
SMILES	OpenEye OEToolkits	1.7.6	CC(C(C(=O)NCC(=O)NC(CC(=O)N)C(=O)NC(C)C(=O)NC(CC(=O)N)C(=O)O)NC(=O)C(CCCNC(=[NH2+])N)NC(=O)C(CC[Se]C)N)O
Canonical SMILES	CACTVS	3.385	C[Se]CC[C@H](N)C(=O)N[C@@H](CCCNC(N)=[NH2+])C(=O)N[C@@H]([C@@H](C)O)C(=O)NCC(=O)N[C@@H](CC(N)=O)C(=O)N[C@@H](C)C(=O)N[C@@H](CC(N)=O)C(O)=O
Canonical SMILES	OpenEye OEToolkits	1.7.6	C[C@H]([C@@H](C(=O)NCC(=O)N[C@@H](CC(=O)N)C(=O)N[C@@H](C)C(=O)N[C@@H](CC(=O)N)C(=O)O)NC(=O)[C@H](CCCNC(=[NH2+])N)NC(=O)[C@H](CC[Se]C)N)O
InChI	InChI	1.03	InChI=1S/C28H50N12O11Se/c1-12(22(45)39-17(27(50)51)10-19(31)43)36-25(48)16(9-18(30)42)37-20(44)11-35-26(49)21(13(2)41)40-24(47)15(5-4-7-34-28(32)33)38-23(46)14(29)6-8-52-3/h12-17,21,41H,4-11,29H2,1-3H3,(H2,30,42)(H2,31,43)(H,35,49)(H,36,48)(H,37,44)(H,38,46)(H,39,45)(H,40,47)(H,50,51)(H4,32,33,34)/p+1/t12?,13-,14+,15-,16-,17?,21-/m0/s1
InChIKey	InChI	1.03	PURCVNCIZJKNTN-BCADJKBXSA-O

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.