PRD_001077

Cul1WHB-Dcn1P-stapled acetylated

Created:2012-09-12
Last modified:  2017-05-04

PRD_001077 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 3TDZ.

Chemical Details
Formal Charge0
Atom Count238
Chiral Atom Count13
Bond Count238
Aromatic Bond Count0
2D diagram of PRD_001077
Toggle HydrogenToggle Labels
Chemical Component Summary
NameCul1WHB-Dcn1P-stapled acetylated
Systematic Name (OpenEye OEToolkits)[(5S)-5-[[(2S,3S)-2-[[(2S)-2-acetamido-4-methylselanyl-butanoyl]amino]-3-methyl-pentanoyl]amino]-6-[[(2S)-1-[[(3S,6S,9S,12S,16Z,21S)-21-[[(2S)-1-[[(2S)-6-azaniumyl-1-[[(2S)-6-azaniumyl-1-oxidanyl-1-oxidanylidene-hexan-2-yl]amino]-1-oxidanylidene-hexan-2-yl]amino]-5-azanyl-1,5-bis(oxidanylidene)pentan-2-yl]carbamoyl]-3-(4-azaniumylbutyl)-9-(hydroxymethyl)-12,21-dimethyl-6-(2-methylpropyl)-2,5,8,11-tetrakis(oxidanylidene)-1,4,7,10-tetrazacyclohenicos-16-en-12-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]amino]-6-oxidanylidene-hexyl]azanium
FormulaC71 H133 N17 O16 Se
Molecular Weight1,559.88
TypePEPTIDE-LIKE
Chemical Descriptors
TypeProgramVersionDescriptor
SMILESACDLabs12.01O=C(NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC1(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)O)CCCC[NH3+])CCCC[NH3+])CCC(=O)N)(CCCC=CCCC1)C)CCCC[NH3+])CC(C)C)CO)C)CC(C)C)CCCC[NH3+])C(C)CC)CC[Se]C)C
SMILESCACTVS3.385CC[CH](C)[CH](NC(=O)[CH](CC[Se]C)NC(C)=O)C(=O)N[CH](CCCC[NH3+])C(=O)N[CH](CC(C)C)C(=O)N[C]1(C)CCCC=CCCC[C](C)(NC(=O)[CH](CCCC[NH3+])NC(=O)[CH](CC(C)C)NC(=O)[CH](CO)NC1=O)C(=O)N[CH](CCC(N)=O)C(=O)N[CH](CCCC[NH3+])C(=O)NC(CCCC[NH3+])C(O)=O
SMILESOpenEye OEToolkits1.7.6CCC(C)C(C(=O)NC(CCCC[NH3+])C(=O)NC(CC(C)C)C(=O)NC1(CCCC=CCCCC(NC(=O)C(NC(=O)C(NC(=O)C(NC1=O)CO)CC(C)C)CCCC[NH3+])(C)C(=O)NC(CCC(=O)N)C(=O)NC(CCCC[NH3+])C(=O)NC(CCCC[NH3+])C(=O)O)C)NC(=O)C(CC[Se]C)NC(=O)C
Canonical SMILESCACTVS3.385 CC[C@H](C)[C@H](NC(=O)[C@H](CC[Se]C)NC(C)=O)C(=O)N[C@@H](CCCC[NH3+])C(=O)N[C@@H](CC(C)C)C(=O)N[C@@]1(C)CCC\C=C/CCC[C@](C)(NC(=O)[C@H](CCCC[NH3+])NC(=O)[C@H](CC(C)C)NC(=O)[C@H](CO)NC1=O)C(=O)N[C@@H](CCC(N)=O)C(=O)N[C@@H](CCCC[NH3+])C(=O)NC(CCCC[NH3+])C(O)=O
Canonical SMILESOpenEye OEToolkits1.7.6 CC[C@H](C)[C@@H](C(=O)N[C@@H](CCCC[NH3+])C(=O)N[C@@H](CC(C)C)C(=O)N[C@]1(CCC/C=C\CCC[C@@](NC(=O)[C@@H](NC(=O)[C@@H](NC(=O)[C@@H](NC1=O)CO)CC(C)C)CCCC[NH3+])(C)C(=O)N[C@@H](CCC(=O)N)C(=O)N[C@@H](CCCC[NH3+])C(=O)N[C@@H](CCCC[NH3+])C(=O)O)C)NC(=O)[C@H](CC[Se]C)NC(=O)C
InChIInChI1.03 InChI=1S/C71H129N17O16Se/c1-11-45(6)57(86-61(95)51(32-39-105-10)77-46(7)90)66(100)80-48(27-17-23-36-73)59(93)83-54(41-44(4)5)65(99)88-71(9)34-21-15-13-12-14-20-33-70(8,87-64(98)49(28-18-24-37-74)79-62(96)53(40-43(2)3)82-63(97)55(42-89)85-69(71)104)68(103)84-50(30-31-56(76)91)60(94)78-47(26-16-22-35-72)58(92)81-52(67(101)102)29-19-25-38-75/h12-13,43-45,47-55,57,89H,11,14-42,72-75H2,1-10H3,(H2,76,91)(H,77,90)(H,78,94)(H,79,96)(H,80,100)(H,81,92)(H,82,97)(H,83,93)(H,84,103)(H,85,104)(H,86,95)(H,87,98)(H,88,99)(H,101,102)/p+4/b13-12-/t45-,47-,48-,49-,50-,51-,52?,53-,54-,55?,57+,70-,71-/m0/s1
InChIKeyInChI1.03 JBSNIMRLEFVMLX-NNBYUKFQSA-R