PRD_000425

Caspase-2 Inhibitor; Ac-VDVAD-Cho

Created:	2012-02-03
Last modified:	2023-09-20

PRD_000425 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 2H65.

Find Related PDB Entries
1 entry where PRD_000425 is present

Chemical Details
Formal Charge	0
Atom Count	77
Chiral Atom Count	5
Bond Count	76
Aromatic Bond Count	0

2D diagram of PRD_000425

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	Caspase-2 Inhibitor; Ac-VDVAD-Cho
Systematic Name (OpenEye OEToolkits)	(3S)-3-[[(2S)-2-acetamido-3-methyl-butanoyl]amino]-4-[[(2S)-1-[[(2S)-1-[[(2S)-1,4-bis(oxidanyl)-4-oxidanylidene-butan-2-yl]amino]-1-oxidanylidene-propan-2-yl]amino]-3-methyl-1-oxidanylidene-butan-2-yl]amino]-4-oxidanylidene-butanoic acid
Formula	C₂₃ H₃₉ N₅ O₁₀
Molecular Weight	545.583
Type	PEPTIDE-LIKE

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	O=C(NC(CC(=O)O)CO)C(NC(=O)C(NC(=O)C(NC(=O)C(NC(=O)C)C(C)C)CC(=O)O)C(C)C)C
SMILES	CACTVS	3.370	CC(C)[CH](NC(C)=O)C(=O)N[CH](CC(O)=O)C(=O)N[CH](C(C)C)C(=O)N[CH](C)C(=O)N[CH](CO)CC(O)=O
SMILES	OpenEye OEToolkits	1.7.6	CC(C)C(C(=O)NC(CC(=O)O)C(=O)NC(C(C)C)C(=O)NC(C)C(=O)NC(CC(=O)O)CO)NC(=O)C
Canonical SMILES	CACTVS	3.370	CC(C)[C@H](NC(C)=O)C(=O)N[C@@H](CC(O)=O)C(=O)N[C@@H](C(C)C)C(=O)N[C@@H](C)C(=O)N[C@H](CO)CC(O)=O
Canonical SMILES	OpenEye OEToolkits	1.7.6	C[C@@H](C(=O)N[C@@H](CC(=O)O)CO)NC(=O)[C@H](C(C)C)NC(=O)[C@H](CC(=O)O)NC(=O)[C@H](C(C)C)NC(=O)C
InChI	InChI	1.03	InChI=1S/C23H39N5O10/c1-10(2)18(25-13(6)30)23(38)27-15(8-17(33)34)21(36)28-19(11(3)4)22(37)24-12(5)20(35)26-14(9-29)7-16(31)32/h10-12,14-15,18-19,29H,7-9H2,1-6H3,(H,24,37)(H,25,30)(H,26,35)(H,27,38)(H,28,36)(H,31,32)(H,33,34)/t12-,14+,15?,18?,19?/m0/s1
InChIKey	InChI	1.03	GMNMHWUHFJLGLK-BPIPLQBOSA-N

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.