PRD_000105

CYCLIC HEXAPEPTIDE CYC-(RRWWRF)

Created:	2012-02-01
Last modified:	2023-09-20

PRD_000105 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 1QVL.

Find Related PDB Entries
2 entries where PRD_000105 is present

Chemical Details
Formal Charge	0
Atom Count	140
Chiral Atom Count	6
Bond Count	145
Aromatic Bond Count	26

2D diagram of PRD_000105

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	CYCLIC HEXAPEPTIDE CYC-(RRWWRF)
Systematic Name (OpenEye OEToolkits)	[azanyl-[3-[(2S,5S,8S,11S,14S,17S)-5,14-bis[3-[[azaniumylidene(azanyl)methyl]amino]propyl]-8,11-bis(1H-indol-3-ylmethyl)-3,6,9,12,15,18-hexakis(oxidanylidene)-17-(phenylmethyl)-1,4,7,10,13,16-hexazacyclooctadec-2-yl]propylamino]methylidene]azanium
Formula	C₄₉ H₆₈ N₁₇ O₆
Molecular Weight	991.175
Type	PEPTIDE-LIKE

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	O=C1NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC1CCCNC(=[NH2+])\N)Cc2ccccc2)CCCNC(=[NH2+])\N)Cc4c3ccccc3nc4)Cc6c5ccccc5nc6)CCCNC(=[NH2+])\N
SMILES	CACTVS	3.370	NC(=[NH2+])NCCC[CH]1NC(=O)[CH](CCCNC(N)=[NH2+])NC(=O)[CH](Cc2ccccc2)NC(=O)[CH](CCCNC(N)=[NH2+])NC(=O)[CH](Cc3c[nH]c4ccccc34)NC(=O)[CH](Cc5c[nH]c6ccccc56)NC1=O
SMILES	OpenEye OEToolkits	1.7.6	c1ccc(cc1)CC2C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)NC(C(=O)N2)CCCNC(=[NH2+])N)Cc3c[nH]c4c3cccc4)Cc5c[nH]c6c5cccc6)CCCNC(=[NH2+])N)CCCNC(=[NH2+])N
Canonical SMILES	CACTVS	3.370	NC(=[NH2+])NCCC[C@@H]1NC(=O)[C@H](CCCNC(N)=[NH2+])NC(=O)[C@H](Cc2ccccc2)NC(=O)[C@H](CCCNC(N)=[NH2+])NC(=O)[C@H](Cc3c[nH]c4ccccc34)NC(=O)[C@H](Cc5c[nH]c6ccccc56)NC1=O
Canonical SMILES	OpenEye OEToolkits	1.7.6	c1ccc(cc1)C[C@H]2C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N[C@H](C(=O)N2)CCCNC(=[NH2+])N)Cc3c[nH]c4c3cccc4)Cc5c[nH]c6c5cccc6)CCCNC(=[NH2+])N)CCCNC(=[NH2+])N
InChI	InChI	1.03	InChI=1S/C49H65N17O6/c50-47(51)56-20-8-17-35-41(67)61-36(18-9-21-57-48(52)53)43(69)65-40(25-30-27-60-34-16-7-5-14-32(30)34)46(72)66-39(24-29-26-59-33-15-6-4-13-31(29)33)45(71)63-37(19-10-22-58-49(54)55)42(68)64-38(44(70)62-35)23-28-11-2-1-3-12-28/h1-7,11-16,26-27,35-40,59-60H,8-10,17-25H2,(H,61,67)(H,62,70)(H,63,71)(H,64,68)(H,65,69)(H,66,72)(H4,50,51,56)(H4,52,53,57)(H4,54,55,58)/p+3/t35-,36-,37-,38-,39-,40-/m0/s1
InChIKey	InChI	1.03	NUAFTYKKXYBVNB-UNHORJANSA-Q

Related Resource References

Resource Name	Reference
PubChem	448204

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.