RCSB PDB - AD7 Ligand Summary Page

AD7

octyl 3-amino-3-deoxy-2-O-(2,6-dideoxy-alpha-L-lyxo-hexopyranosyl)-beta-D-galactopyranoside

Created: 2008-01-04
Last modified:  2020-06-05

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Chemical Details

Formal Charge0
Atom Count68
Chiral Atom Count9
Bond Count69
Aromatic Bond Count0
2D diagram of AD7

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Chemical Component Summary

Nameoctyl 3-amino-3-deoxy-2-O-(2,6-dideoxy-alpha-L-lyxo-hexopyranosyl)-beta-D-galactopyranoside
Synonyms2-deoxy-Fuc-3-amino-Gal-H-antigen disaccharide; amino-deoxy-acceptor
Systematic Name (OpenEye OEToolkits)(2S,3S,4S,6S)-6-[(2R,3R,4S,5R,6R)-4-amino-5-hydroxy-6-(hydroxymethyl)-2-octoxy-oxan-3-yl]oxy-2-methyl-oxane-3,4-diol
FormulaC20 H39 N O8
Molecular Weight421.526
TypeNON-POLYMER

Chemical Descriptors

TypeProgram Version Descriptor
SMILESACDLabs10.04O(CCCCCCCC)C2OC(C(O)C(N)C2OC1OC(C)C(O)C(O)C1)CO
SMILESCACTVS3.341CCCCCCCCO[CH]1O[CH](CO)[CH](O)[CH](N)[CH]1O[CH]2C[CH](O)[CH](O)[CH](C)O2
SMILESOpenEye OEToolkits1.5.0CCCCCCCCOC1C(C(C(C(O1)CO)O)N)OC2CC(C(C(O2)C)O)O
Canonical SMILESCACTVS3.341 CCCCCCCCO[C@@H]1O[C@H](CO)[C@H](O)[C@H](N)[C@H]1O[C@H]2C[C@H](O)[C@H](O)[C@H](C)O2
Canonical SMILESOpenEye OEToolkits1.5.0 CCCCCCCCO[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)N)O[C@H]2C[C@@H]([C@@H]([C@@H](O2)C)O)O
InChIInChI1.03 InChI=1S/C20H39NO8/c1-3-4-5-6-7-8-9-26-20-19(16(21)18(25)14(11-22)28-20)29-15-10-13(23)17(24)12(2)27-15/h12-20,22-25H,3-11,21H2,1-2H3/t12-,13-,14+,15-,16-,17+,18-,19+,20+/m0/s1
InChIKeyInChI1.03 GHTLMVRROQXELT-HTYYFBMYSA-N

Drug Info: DrugBank

DrugBank IDDB07341 
Nameoctyl 3-amino-3-deoxy-2-O-(2,6-dideoxy-alpha-L-lyxo-hexopyranosyl)-beta-D-galactopyranoside
Groups experimental
Synonymsoctyl 3-amino-3-deoxy-2-O-(2,6-dideoxy-alpha-L-lyxo-hexopyranosyl)-beta-D-galactopyranoside

Drug Targets

NameTarget SequencePharmacological ActionActions
Histo-blood group ABO system transferaseMAEVLRTLAGKPKCHALRPMILFLIMLVLVLFGYGVLSPRSLMPGSLERG...unknown
Drug Info/Drug Targets: DrugBank 3.0: a comprehensive resource for 'omics' research on drugs. Knox C, Law V, Jewison T, Liu P, Ly S, Frolkis A, Pon A, Banco K, Mak C, Neveu V, Djoumbou Y, Eisner R, Guo AC, Wishart DS. Nucleic Acids Res. 2011 Jan; 39 (Database issue):D1035-41. | PMID:21059682

Related Resource References

Resource NameReference
PubChem 46937064