A1DCZ

[(2S,3S,4R,5R)-5-(4-amino-7H-pyrrolo[2,3-d]pyrimidin-7-yl)-2-fluoro-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen phosphate

Created:	2026-04-20
Last modified:	2026-06-24

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1 entries where A1DCZ is found as a standalone ligand

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Chemical Details
Formal Charge	0
Atom Count	38
Chiral Atom Count	4
Bond Count	40
Aromatic Bond Count	10

2D diagram of A1DCZ

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Chemical Component Summary
Name	[(2S,3S,4R,5R)-5-(4-amino-7H-pyrrolo[2,3-d]pyrimidin-7-yl)-2-fluoro-3,4-dihydroxyoxolan-2-yl]methyl dihydrogen phosphate
Systematic Name (OpenEye OEToolkits)	[(2~{S},3~{S},4~{R},5~{R})-5-(4-azanylpyrrolo[2,3-d]pyrimidin-7-yl)-2-fluoranyl-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate
Formula	C₁₁ H₁₄ F N₄ O₇ P
Molecular Weight	364.224
Type	RNA LINKING

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	14.52	O=P(O)(O)OCC1(F)OC(n2ccc3c(N)ncnc32)C(O)C1O
SMILES	CACTVS	3.385	Nc1ncnc2n(ccc12)[CH]3O[C](F)(CO[P](O)(O)=O)[CH](O)[CH]3O
SMILES	OpenEye OEToolkits	3.1.0.0	c1cn(c2c1c(ncn2)N)C3C(C(C(O3)(COP(=O)(O)O)F)O)O
Canonical SMILES	CACTVS	3.385	Nc1ncnc2n(ccc12)[C@@H]3O[C@](F)(CO[P](O)(O)=O)[C@@H](O)[C@H]3O
Canonical SMILES	OpenEye OEToolkits	3.1.0.0	c1cn(c2c1c(ncn2)N)[C@H]3[C@@H]([C@@H]([C@](O3)(COP(=O)(O)O)F)O)O
InChI	InChI	1.06	InChI=1S/C11H14FN4O7P/c12-11(3-22-24(19,20)21)7(18)6(17)10(23-11)16-2-1-5-8(13)14-4-15-9(5)16/h1-2,4,6-7,10,17-18H,3H2,(H2,13,14,15)(H2,19,20,21)/t6-,7+,10-,11-/m1/s1
InChIKey	InChI	1.06	HLGBNZPYXFQXAX-LRMGWDNHSA-N

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.