A1C3N

(10R,14S,21P)-3,25-difluoro-16-{[(2R,4R,7aS)-2-fluorotetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}-23-hydroxy-10-methyl-5,6,10,11,12,13-hexahydro-4H-10,14-methano-21,18-(metheno)naphtho[1,8-no]pyrimido[4,5-i][1,3,8,12]oxatriazacyclononadecin-8(9H)-one

Created:	2025-12-17
Last modified:	2026-06-03

Find Related PDB Entry
1 entries where A1C3N is found as a standalone ligand

Find related ligands: Help
Similar Ligands (Stereospecific) Similar Ligands (including Stereoisomers) Similar Ligands (Quick Screen) Similar Ligands (Substructure Stereospecific) Similar Ligands (Substructure including Stereoisomers)

Chemical Details
Formal Charge	0
Atom Count	85
Chiral Atom Count	4
Bond Count	92
Aromatic Bond Count	22

2D diagram of A1C3N

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	(10R,14S,21P)-3,25-difluoro-16-{[(2R,4R,7aS)-2-fluorotetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}-23-hydroxy-10-methyl-5,6,10,11,12,13-hexahydro-4H-10,14-methano-21,18-(metheno)naphtho[1,8-no]pyrimido[4,5-i][1,3,8,12]oxatriazacyclononadecin-8(9H)-one
Systematic Name (OpenEye OEToolkits)	(11~{S},15~{R})-23,32-bis(fluoranyl)-8-[[(2~{R},8~{S})-2-fluoranyl-1,2,3,5,6,7-hexahydropyrrolizin-8-yl]methoxy]-15-methyl-28-oxidanyl-18-oxa-3,7,9,11,16-pentazahexacyclo[20.7.1.1^{2,6}.1^{11,15}.0^{5,10}.0^{26,30}]dotriaconta-1(29),2,4,6(32),7,9,22(30),23,25,27-decaen-17-one
Formula	C₃₅ H₃₇ F₃ N₆ O₄
Molecular Weight	662.701
Type	NON-POLYMER

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	14.52	FC1CC2(CCCN2C1)COc1nc2N3CCCC(C)(NC(=O)OCCCc4c(F)ccc5cc(O)cc(c54)c4ncc2c(n1)c4F)C3
SMILES	CACTVS	3.385	C[C]12CCC[N](C1)c3nc(OC[C]45CCCN4C[CH](F)C5)nc6c(F)c(ncc36)c7cc(O)cc8ccc(F)c(CCCOC(=O)N2)c78
SMILES	OpenEye OEToolkits	3.1.0.0	CC12CCCN(C1)c3c4cnc(c(c4nc(n3)OCC56CCCN5CC(C6)F)F)-c7cc(cc8c7c(c(cc8)F)CCCOC(=O)N2)O
Canonical SMILES	CACTVS	3.385	C[C@@]12CCC[N@@](C1)c3nc(OC[C@@]45CCCN4C[C@H](F)C5)nc6c(F)c(ncc36)c7cc(O)cc8ccc(F)c(CCCOC(=O)N2)c78
Canonical SMILES	OpenEye OEToolkits	3.1.0.0	C[C@@]12CCC[N@@](C1)c3c4cnc(c(c4nc(n3)OC[C@@]56CCCN5C[C@@H](C6)F)F)-c7cc(cc8c7c(c(cc8)F)CCCOC(=O)N2)O
InChI	InChI	1.06	InChI=1S/C35H37F3N6O4/c1-34-8-3-10-43(18-34)31-25-16-39-29(28(38)30(25)40-32(41-31)48-19-35-9-4-11-44(35)17-21(36)15-35)24-14-22(45)13-20-6-7-26(37)23(27(20)24)5-2-12-47-33(46)42-34/h6-7,13-14,16,21,45H,2-5,8-12,15,17-19H2,1H3,(H,42,46)/t21-,34-,35+/m1/s1
InChIKey	InChI	1.06	MPOACACPVZTNNC-CRWXXVDISA-N

Related Resource References

Resource Name	Reference
PubChem	177327108

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.