GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 8TLR designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
8TLR_GDP_A_201 | 95% | 49% | 0.078 | 0.981 | 0.81 | 1.16 | - | 3 | 0 | 0 | 100% | 1 |
8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
5E95_GDP_A_201 | 99% | 49% | 0.054 | 0.988 | 0.95 | 1.03 | 1 | 1 | 0 | 0 | 100% | 1 |
6MQT_GDP_B_201 | 99% | 66% | 0.055 | 0.985 | 0.83 | 0.5 | 2 | - | 0 | 0 | 100% | 0.9975 |
1ZVQ_GDP_A_180 | 97% | 45% | 0.064 | 0.982 | 0.93 | 1.17 | 1 | 3 | 0 | 0 | 100% | 1 |
8CNN_GDP_A_206 | 97% | 52% | 0.067 | 0.985 | 0.99 | 0.86 | 1 | 1 | 0 | 0 | 100% | 1 |
1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
5UQW_GDP_A_1002 | 100% | 47% | 0.04 | 0.99 | 1.04 | 1.01 | 2 | 2 | 0 | 0 | 100% | 1 |
2PHN_GDP_A_2696 | 100% | 44% | 0.046 | 0.99 | 1.08 | 1.08 | 1 | 2 | 0 | 0 | 100% | 1 |
6TAN_GDP_A_201 | 100% | 55% | 0.046 | 0.99 | 0.88 | 0.86 | - | 1 | 0 | 0 | 100% | 1 |