NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose
NAG is a Ligand Of Interest in 8PMS designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
8PMS_NAG_A_302 | 23% | 56% | 0.191 | 0.813 | 0.81 | 0.9 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
8PMS_NAG_C_302 | 20% | 89% | 0.247 | 0.847 | 0.25 | 0.4 | - | - | 0 | 0 | 100% | 0.9333 |
8PMS_NAG_B_302 | 19% | 75% | 0.257 | 0.849 | 0.38 | 0.6 | - | - | 0 | 0 | 100% | 0.9333 |
8PMS_NAG_C_301 | 17% | 76% | 0.305 | 0.886 | 0.31 | 0.64 | - | 1 | 0 | 0 | 100% | 0.9333 |
8PMS_NAG_D_301 | 16% | 48% | 0.182 | 0.75 | 0.8 | 1.21 | 1 | 1 | 0 | 0 | 100% | 0.9333 |
8PMS_NAG_D_302 | 8% | 76% | 0.279 | 0.761 | 0.44 | 0.52 | - | - | 0 | 0 | 100% | 0.9333 |
8PMS_NAG_C_304 | 7% | 42% | 0.245 | 0.696 | 0.76 | 1.48 | 1 | 3 | 0 | 0 | 100% | 0.9333 |
8PMS_NAG_B_301 | 3% | 69% | 0.452 | 0.801 | 0.36 | 0.81 | - | 1 | 0 | 0 | 100% | 0.9333 |
8PMS_NAG_A_301 | 3% | 65% | 0.437 | 0.763 | 0.56 | 0.78 | - | - | 1 | 0 | 100% | 0.9333 |
1OC7_NAG_A_500 | 100% | 60% | 0.04 | 0.991 | 0.61 | 0.9 | - | 1 | 0 | 0 | 100% | 0.9333 |
1OC6_NAG_A_500 | 100% | 67% | 0.041 | 0.988 | 0.46 | 0.8 | - | 1 | 0 | 0 | 100% | 0.9333 |
1UWC_NAG_A_262 | 100% | 54% | 0.046 | 0.99 | 0.83 | 0.93 | - | - | 0 | 0 | 100% | 0.9333 |
6ZE6_NAG_B_703 | 100% | 52% | 0.044 | 0.984 | 0.78 | 1.07 | - | 2 | 0 | 0 | 100% | 0.8667 |
6ZE2_NAG_B_704 | 99% | 56% | 0.042 | 0.979 | 0.73 | 0.95 | - | 1 | 0 | 0 | 100% | 0.9333 |