8J38 | pdb_00008j38


V2M: N-[(2S)-1-({(2S,3S)-3,4-dihydroxy-1-[(3S)-2-oxopyrrolidin-3-yl]butan-2-yl}amino)-4-methyl-1-oxopentan-2-yl]-4-methoxy-1H-indole-2-carboxamide

V2M is a Ligand Of Interest in 8J38 designated by the Author


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8J38_V2M_B_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8J38_V2M_B_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8J38_V2M_B_401Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
8J38_V2M_B_401 59% 27% 0.11 0.8921.79 1.17 2 300100%1
8J38_V2M_A_401 46% 5% 0.116 0.8512.79 2.41 6 900100%1
6XHL_V2M_A_9001 93% 17% 0.069 0.9621.77 1.8 3 400100%1
9MEI_V2M_A_402 89% 40% 0.069 0.9470.99 1.36 1 500100%1
9ELV_V2M_A_402 88% 25% 0.07 0.9451.21 1.85 4 1000100%1
9EL4_V2M_A_402 87% 25% 0.068 0.941.21 1.85 4 1000100%1
6XHM_V2M_B_9001 81% 71% 0.085 0.9350.54 0.56 - -00100%1
8J35_V2M_B_401 80% 5% 0.086 0.9342.86 2.35 6 800100%1