8ED4
MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
MGD is a Ligand Of Interest in 8ED4 designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
8ED4_MGD_E_2002 | 92% | 46% | 0.093 | 0.985 | 0.88 | 1.18 | 2 | 2 | 0 | 0 | 100% | 1 |
8ED4_MGD_C_2002 | 88% | 50% | 0.098 | 0.973 | 0.89 | 1.02 | 3 | 2 | 1 | 0 | 100% | 1 |
8ED4_MGD_A_2001 | 88% | 46% | 0.106 | 0.981 | 0.96 | 1.14 | 3 | 3 | 0 | 0 | 100% | 1 |
8ED4_MGD_A_2002 | 87% | 50% | 0.105 | 0.978 | 0.79 | 1.13 | 3 | 3 | 2 | 0 | 100% | 1 |
8ED4_MGD_C_2001 | 86% | 50% | 0.108 | 0.978 | 0.82 | 1.1 | 3 | 3 | 2 | 0 | 100% | 1 |
8ED4_MGD_E_2001 | 86% | 50% | 0.11 | 0.98 | 0.91 | 1.02 | 3 | 2 | 2 | 0 | 100% | 1 |
8ED4_MGD_G_2002 | 84% | 48% | 0.119 | 0.98 | 0.86 | 1.13 | 1 | 4 | 1 | 0 | 100% | 1 |
8ED4_MGD_G_2001 | 82% | 52% | 0.128 | 0.984 | 0.84 | 1 | 1 | 3 | 1 | 0 | 100% | 1 |
8CCQ_MGD_E_2002 | 96% | 24% | 0.08 | 0.988 | 1.5 | 1.64 | 5 | 6 | 2 | 0 | 100% | 1 |
5NQD_MGD_E_2002 | 92% | 29% | 0.092 | 0.981 | 1.37 | 1.47 | 5 | 8 | 0 | 0 | 100% | 1 |
4AAY_MGD_G_2001 | 63% | 25% | 0.167 | 0.962 | 1.24 | 1.81 | 2 | 11 | 1 | 0 | 100% | 1 |
1G8K_MGD_E_5201 | 100% | 27% | 0.03 | 0.991 | 1.49 | 1.47 | 7 | 4 | 2 | 0 | 100% | 1 |
3O5A_MGD_A_1804 | 100% | 23% | 0.049 | 0.99 | 1.22 | 1.96 | 3 | 14 | 2 | 0 | 100% | 1 |
8BQH_MGD_A_1101 | 99% | 44% | 0.051 | 0.99 | 0.98 | 1.17 | 2 | 3 | 0 | 0 | 100% | 1 |
2E7Z_MGD_A_801 | 99% | 28% | 0.056 | 0.99 | 1.32 | 1.57 | 2 | 8 | 1 | 0 | 100% | 1 |
8RJA_MGD_B_504 | 99% | 31% | 0.048 | 0.979 | 1.26 | 1.48 | 4 | 8 | 2 | 0 | 100% | 1 |