UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 8B6D designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
8B6D_UDP_A_301 | 67% | 65% | 0.134 | 0.941 | 0.58 | 0.75 | - | - | 1 | 0 | 100% | 0.7 |
8B6D_UDP_B_301 | 50% | 63% | 0.154 | 0.906 | 0.54 | 0.87 | - | - | 0 | 0 | 100% | 0.65 |
4PHR_UDP_A_301 | 100% | 42% | 0.042 | 0.989 | 0.84 | 1.41 | - | 4 | 0 | 0 | 100% | 1 |
1GX4_UDP_A_401 | 100% | 32% | 0.046 | 0.991 | 1.68 | 1.03 | 2 | 3 | 0 | 0 | 100% | 1 |
3U2V_UDP_B_270 | 99% | 33% | 0.049 | 0.989 | 1.12 | 1.52 | 2 | 6 | 0 | 0 | 100% | 1 |
5GY7_UDP_A_401 | 99% | 40% | 0.049 | 0.989 | 1.09 | 1.23 | 1 | 3 | 0 | 0 | 100% | 1 |
6GX2_UDP_A_402 | 99% | 52% | 0.053 | 0.989 | 0.86 | 1.01 | - | 2 | 0 | 0 | 100% | 1 |