AMP: ADENOSINE MONOPHOSPHATE
AMP is a Ligand Of Interest in 6YMI designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6YMI_AMP_M_102 | 65% | 45% | 0.155 | 0.958 | 0.89 | 1.24 | 1 | 2 | 0 | 0 | 100% | 1 |
6YMI_AMP_A_103 | 64% | 46% | 0.141 | 0.941 | 0.89 | 1.19 | 1 | 2 | 0 | 0 | 100% | 1 |
6YMI_AMP_F_102 | 58% | 45% | 0.165 | 0.944 | 0.88 | 1.25 | 1 | 2 | 0 | 0 | 100% | 1 |
6YMI_AMP_N_101 | 43% | 47% | 0.169 | 0.891 | 0.85 | 1.18 | 1 | 2 | 1 | 0 | 100% | 1 |
6YMI_AMP_I_102 | 41% | 46% | 0.174 | 0.887 | 0.87 | 1.19 | 1 | 2 | 0 | 0 | 100% | 1 |
6YMI_AMP_C_102 | 40% | 46% | 0.179 | 0.89 | 0.89 | 1.18 | 1 | 2 | 0 | 0 | 100% | 1 |
6YMI_AMP_O_201 | 37% | 46% | 0.193 | 0.893 | 0.88 | 1.18 | 1 | 2 | 0 | 0 | 100% | 1 |
6YMI_AMP_G_101 | 32% | 47% | 0.212 | 0.884 | 0.86 | 1.16 | 1 | 2 | 3 | 0 | 100% | 1 |
6YMI_AMP_A_102 | 26% | 47% | 0.228 | 0.867 | 0.85 | 1.17 | 1 | 2 | 3 | 0 | 100% | 1 |
7SNB_AMP_A_303 | 100% | 55% | 0.045 | 0.993 | 0.75 | 0.98 | - | 1 | 0 | 0 | 100% | 0.783 |
3CLT_AMP_C_1262 | 100% | 40% | 0.046 | 0.987 | 0.91 | 1.4 | 1 | 4 | 0 | 0 | 100% | 1 |
3CLR_AMP_C_1262 | 100% | 41% | 0.048 | 0.989 | 1.01 | 1.29 | 1 | 3 | 0 | 0 | 100% | 1 |
5NRH_AMP_B_700 | 99% | 34% | 0.051 | 0.989 | 1.23 | 1.39 | 3 | 2 | 0 | 0 | 100% | 1 |
4M0K_AMP_D_300 | 99% | 40% | 0.047 | 0.983 | 0.89 | 1.43 | 1 | 4 | 0 | 0 | 100% | 1 |